PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0088s0099.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 405aa    MW: 44891.2 Da    PI: 8.5829
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0088s0099.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3103.61.1e-3298202199
                          EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-. CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld. 85 
                          f+kv tpsdv+k++rlv+pk++ae++    ++++e++  l +ed++g+sW+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  
  Kaladp0088s0099.2.p  98 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSSNEKGLLLNFEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGv 187
                          89****************************66677899*************************************************666 PP

                          SS.SEE..EEEEE-S CS
                   B3  86 gr.sefelvvkvfrk 99 
                          g+ ++ +l++ ++r+
  Kaladp0088s0099.2.p 188 GEaEKHRLFIDWRRR 202
                          88899999*999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    
MEYGSKDEEY NNSIRHDFPA YGSGSSRDWF ASIKFAAADD SSDIMEASPL TANENNYDHE  60
HVRRVSDSHQ QQQHYAQQQA LGIGIGGQIC NIEREHMFDK VVTPSDVGKL NRLVIPKQHA  120
EKYFPLDSSS NEKGLLLNFE DLTGKSWRFR YSYWNSSQSY VMTKGWSRFV KEKKLDAGDI  180
VSFQRGVGEA EKHRLFIDWR RRPITTLPID GSPFYSQFHR SVGGTPSWSP LLLRPPPARV  240
HPSISFQIPN HPGSHLFSTG YGGSSGNYMG QVFTNKTSVV YLTSPEGFGM VRGRAGEGIG  300
ERIPVVIQSV PVVQGKKVET AAKRLRLFGV NMECPASPDT STSDEFEILS SSSGIPVSST  360
TPRHHLSQLD PSSSTLFLPS STRMYNGTLV SNNGKMSKSL DLGI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01030.12e-67B3 family protein