PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0087s0195.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | NF-YB | ||||||||
Protein Properties | Length: 161aa MW: 17291.3 Da PI: 5.6716 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 181.9 | 5.2e-57 | 27 | 124 | 1 | 98 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkky 90 vreqdrflPian+srimkk+lPan+ki+kdaketvqecvsefisfvtseasdkc +ekrkt+ngddllwa++tlGfedy++pl++yl++y Kaladp0087s0195.2.p 27 VREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFVTSEASDKCLKEKRKTVNGDDLLWAMGTLGFEDYIDPLRLYLNQY 116 69**************************************************************************************** PP NF-YB 91 relegekk 98 re+eg++k Kaladp0087s0195.2.p 117 REIEGDTK 124 *****975 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 161 aa Download sequence |
MAEAPASPGG GGSHDSGGDH SPRSNNVREQ DRFLPIANIS RIMKKALPAN GKIAKDAKET 60 VQECVSEFIS FVTSEASDKC LKEKRKTVNG DDLLWAMGTL GFEDYIDPLR LYLNQYREIE 120 GDTKGTAKGG DASAKKDTGV HPQESNVLGQ HMIVPMQGSE * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G53340.1 | 5e-73 | NF-YB family protein |