PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0087s0171.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

SBP

Protein Properties

Length: 363aa MW: 39374.7 Da PI: 8.6609

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0087s0171.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.9	9.1e-41	67	142	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +Cqv+gC++dl+++k y++rhkvC +hsk++vv+v g+++rfCqqCsrfh+l efD+ekrsCrrrLa+hnerrrk+ Kaladp0087s0171.1.p 67 RCQVHGCNVDLTHVKAYYSRHKVCIMHSKSAVVTVGGVQKRFCQQCSRFHQLPEFDQEKRSCRRRLAGHNERRRKP 142 6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MAMSSSSITD SPNSSESLNG LTIGHKIYFE DVGVAAMPKS ANASSFPAAS PSKKMKPATS 60 RLQHPPRCQV HGCNVDLTHV KAYYSRHKVC IMHSKSAVVT VGGVQKRFCQ QCSRFHQLPE 120 FDQEKRSCRR RLAGHNERRR KPPPVSLLSS RYGTSSIFDT NNHGRGFLLD FSKNSGMPDM 180 DGHASSGDRR SILQTQVIGK FLMQPWTNSS ENPPSDHYFQ NAGGGASFPS QEIPRGGYYA 240 GGVSSESSCA LSLLSNEPWG STKNRAASDL GVLSDNLLNP QNSAVTNQIP SSSWGFNGNE 300 SAGVSHKMFS DSDLGLGHIP QNLAANLYSG EHGMGEQDGR QDMGPDLSSR FYESVQQMHW 360 SL*

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MAMSSSSITD SPNSSESLNG LTIGHKIYFE DVGVAAMPKS ANASSFPAAS PSKKMKPATS  60
RLQHPPRCQV HGCNVDLTHV KAYYSRHKVC IMHSKSAVVT VGGVQKRFCQ QCSRFHQLPE  120
FDQEKRSCRR RLAGHNERRR KPPPVSLLSS RYGTSSIFDT NNHGRGFLLD FSKNSGMPDM  180
DGHASSGDRR SILQTQVIGK FLMQPWTNSS ENPPSDHYFQ NAGGGASFPS QEIPRGGYYA  240
GGVSSESSCA LSLLSNEPWG STKNRAASDL GVLSDNLLNP QNSAVTNQIP SSSWGFNGNE  300
SAGVSHKMFS DSDLGLGHIP QNLAANLYSG EHGMGEQDGR QDMGPDLSSR FYESVQQMHW  360
SL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	2e-44	SBP family protein