PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0087s0083.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

E2F/DP

Protein Properties

Length: 413aa MW: 45586.8 Da PI: 4.5881

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0087s0083.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.1	2.6e-27	83	148	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+g+++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+irwkg Kaladp0087s0083.2.p 83 RYDSSLGLLTKKFINLIKHAEDGMLDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIRWKG 148 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MICKSLQLKR KSMADDNEVA SSNWTNSTVY TEVDKSPLKK PVSAKGGRVY NKSKGSKGNK 60 AAAQTPLLTA GSPSALTSAG NCRYDSSLGL LTKKFINLIK HAEDGMLDLN KAAETLEVQK 120 RRIYDITNVL EGIGLIEKKL KNRIRWKGLD VSQPDGVETD VSRLQIDVEN LNLEEQNLDD 180 QIRGMQERLR DLSEDENNQK WLFVTEEDIK SLPCFQNETL IAIKAPHGTT LEVPDPDEAA 240 NFPQRRYRIV LRSTMGPIDV YLVSQFEEKF EDLNGAEQSV NCPVASTSRP VENSGTRVAN 300 AQSTENDITG QAQDAHRVPS DTLMNDNGSD DFVGGIMKIV PDVNADTDYW FLSDAELSVT 360 ELWHPESGIG NHLDDMPHHT DYDIGDTSIP QPQTPPSALM DIPSSSVNST PR*

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MICKSLQLKR KSMADDNEVA SSNWTNSTVY TEVDKSPLKK PVSAKGGRVY NKSKGSKGNK  60
AAAQTPLLTA GSPSALTSAG NCRYDSSLGL LTKKFINLIK HAEDGMLDLN KAAETLEVQK  120
RRIYDITNVL EGIGLIEKKL KNRIRWKGLD VSQPDGVETD VSRLQIDVEN LNLEEQNLDD  180
QIRGMQERLR DLSEDENNQK WLFVTEEDIK SLPCFQNETL IAIKAPHGTT LEVPDPDEAA  240
NFPQRRYRIV LRSTMGPIDV YLVSQFEEKF EDLNGAEQSV NCPVASTSRP VENSGTRVAN  300
AQSTENDITG QAQDAHRVPS DTLMNDNGSD DFVGGIMKIV PDVNADTDYW FLSDAELSVT  360
ELWHPESGIG NHLDDMPHHT DYDIGDTSIP QPQTPPSALM DIPSSSVNST PR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-140	E2F/DP family protein