PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0085s0095.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

SBP

Protein Properties

Length: 973aa MW: 106308 Da PI: 5.9645

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0085s0095.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.3	8e-42	144	220	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqve+C adls+ak+yhrrhkvCe+hska+++lv +++qrfCqqCsrfh+l+efDe+krsCrrrLa+hn+rrrk++ Kaladp0085s0095.1.p 144 VCQVEDCGADLSKAKDYHRRHKVCEMHSKASTALVGNVMQRFCQQCSRFHALQEFDEGKRSCRRRLAGHNKRRRKTN 220 6**************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 973 aa Download sequence
MEDNVGDQIH QFYGTGSSSL NPMGKRSLEW DLNDWKWDGH LFVASPLNCK PSGYSSRRFL 60 TETGGSSNSS STCSDDVNMG NDAREQELLK LTSAAGGELG ESGNLSLKLG GHGVPTSETE 120 VRNWEGANGK KIRVVGGSSS NRAVCQVEDC GADLSKAKDY HRRHKVCEMH SKASTALVGN 180 VMQRFCQQCS RFHALQEFDE GKRSCRRRLA GHNKRRRKTN PLNVAAGTSN NDDQSNSYLL 240 LTLLKILADL HSNSSDNTKN QDMLSHLLRS LADHTGANGG RNLSEVVSAL PATVQQGLLN 300 SREQLTSAVK EMPQNGSPSA DVSPPPSTLL LIKDSPPGSS VAPSTTAGQI KPNNFDLNDV 360 YVDSDDGTED LEGFRVPANN GTSSPGCPSW IQQDVHNSSP PQVSRNSDSG SAQSPSSSNE 420 GDQIRTDRIV FKLFGKEPGD LPVALRTQIL DWLAHTPTDI ESYIKPGCIV LTIYLRLPES 480 VWDELCLDLS SSLSQLIDVS EESFWSTGWV YVRVQDQVAF IDNGQVVLDT TLPYISSASR 540 ILSVRPIAIP ISEKASFSIK GCNLFPPNSR LLCALEGQYL AQENIPESQE EFSGHNDSDK 600 LQILNYSCSI PAIIGRGFVE VEDNGLGSDF FPFIVAETDI CCEIRTLEST LESTETDETS 660 GNGEPDARTK AIDFIQEMGW LLRRSQQRLQ LGYSNQKAEE LFHFDRLKWL MEFALDHGWC 720 AVVKKLLDTL CSGAVGSGEH DSLVVAVADM GILHRAVRRN SKPLVELLLR YVHEGTSNNM 780 RMKGGGLLFT PDAMGPAGLT PLHIAAGRDG AEAVIDALTD DPNKVGIVAW KSARDSTGAS 840 PEDYARLRGH YSYIHLVQRK TSKKLYTPSH VVLDIPSTLS DSKPNKTETA TQKSSFQISK 900 FAMRTGQGPC KICDQKLIYR TVNTSLAYKP AVLSMVAVAA VCVCVALLFK SCPEVLYVLS 960 PFRWENLEYR SS*

Sequence ? help Back to Top

Protein Sequence Length: 973 aa Download sequence

MEDNVGDQIH QFYGTGSSSL NPMGKRSLEW DLNDWKWDGH LFVASPLNCK PSGYSSRRFL  60
TETGGSSNSS STCSDDVNMG NDAREQELLK LTSAAGGELG ESGNLSLKLG GHGVPTSETE  120
VRNWEGANGK KIRVVGGSSS NRAVCQVEDC GADLSKAKDY HRRHKVCEMH SKASTALVGN  180
VMQRFCQQCS RFHALQEFDE GKRSCRRRLA GHNKRRRKTN PLNVAAGTSN NDDQSNSYLL  240
LTLLKILADL HSNSSDNTKN QDMLSHLLRS LADHTGANGG RNLSEVVSAL PATVQQGLLN  300
SREQLTSAVK EMPQNGSPSA DVSPPPSTLL LIKDSPPGSS VAPSTTAGQI KPNNFDLNDV  360
YVDSDDGTED LEGFRVPANN GTSSPGCPSW IQQDVHNSSP PQVSRNSDSG SAQSPSSSNE  420
GDQIRTDRIV FKLFGKEPGD LPVALRTQIL DWLAHTPTDI ESYIKPGCIV LTIYLRLPES  480
VWDELCLDLS SSLSQLIDVS EESFWSTGWV YVRVQDQVAF IDNGQVVLDT TLPYISSASR  540
ILSVRPIAIP ISEKASFSIK GCNLFPPNSR LLCALEGQYL AQENIPESQE EFSGHNDSDK  600
LQILNYSCSI PAIIGRGFVE VEDNGLGSDF FPFIVAETDI CCEIRTLEST LESTETDETS  660
GNGEPDARTK AIDFIQEMGW LLRRSQQRLQ LGYSNQKAEE LFHFDRLKWL MEFALDHGWC  720
AVVKKLLDTL CSGAVGSGEH DSLVVAVADM GILHRAVRRN SKPLVELLLR YVHEGTSNNM  780
RMKGGGLLFT PDAMGPAGLT PLHIAAGRDG AEAVIDALTD DPNKVGIVAW KSARDSTGAS  840
PEDYARLRGH YSYIHLVQRK TSKKLYTPSH VVLDIPSTLS DSKPNKTETA TQKSSFQISK  900
FAMRTGQGPC KICDQKLIYR TVNTSLAYKP AVLSMVAVAA VCVCVALLFK SCPEVLYVLS  960
PFRWENLEYR SS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60030.1	0.0	SBP family protein