PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0085s0080.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | C2H2 | ||||||||
Protein Properties | Length: 480aa MW: 51893.9 Da PI: 9.8883 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.2 | 2.9e-05 | 74 | 96 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H Kaladp0085s0080.2.p 74 FICEICNKGFQRDQNLQLHRRGH 96 89*******************88 PP | |||||||
2 | zf-C2H2 | 12.2 | 0.00056 | 151 | 173 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ Kaladp0085s0080.2.p 151 WKCDKCSKKYAVQSDWKAHSKTC 173 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 480 aa Download sequence |
MQHHMLSSSD DAFSVPNPSI RGFPPLQEND PIQNPKIDPN PVSNKKKRNL PGTPDPDAEV 60 IALSPKSLMA TNRFICEICN KGFQRDQNLQ LHRRGHNLPW KLKQRNNKEI PKKKVYICPE 120 KTCVHHDPSR ALGDLTGIKK HFSRKHGEKK WKCDKCSKKY AVQSDWKAHS KTCGTREYKC 180 DCGTLFSRKD SFITHRAFCD ALTEESARFA AQAASNNLSF RNDHTMLSDL SNGNNPQQLN 240 LPSGFGSSTG YPNQDISSIS QFDSVFRPDN FNGMSDQMFG VGGSSGGLFG SSSSSMPDFG 300 QLPTSTSASL SLSSSSIMSQ TLMKPELLRN NSNINKTHTN MLVGTSSLYS SDTKTDKSPH 360 PSAAMSATAL LQKAAQMGST RSTTAAAASN PFFGNNNTNN AATIPALLSS SSTSSRPSNI 420 SLNSLRPDNL RNNLTRDFLG ISNGDAPASG SSNPFSPNEL AKFAASAAAT GFTQFAGNH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03150.1 | 1e-105 | C2H2 family protein |