PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0085s0080.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 480aa    MW: 51893.9 Da    PI: 9.8883
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0085s0080.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.22.9e-057496123
                         EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                         + C++C+k F r  nL+ H r H
  Kaladp0085s0080.2.p 74 FICEICNKGFQRDQNLQLHRRGH 96
                         89*******************88 PP

2zf-C2H212.20.00056151173123
                          EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                          +kC +C+k +  +s+ k H +t+
  Kaladp0085s0080.2.p 151 WKCDKCSKKYAVQSDWKAHSKTC 173
                          58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    
MQHHMLSSSD DAFSVPNPSI RGFPPLQEND PIQNPKIDPN PVSNKKKRNL PGTPDPDAEV  60
IALSPKSLMA TNRFICEICN KGFQRDQNLQ LHRRGHNLPW KLKQRNNKEI PKKKVYICPE  120
KTCVHHDPSR ALGDLTGIKK HFSRKHGEKK WKCDKCSKKY AVQSDWKAHS KTCGTREYKC  180
DCGTLFSRKD SFITHRAFCD ALTEESARFA AQAASNNLSF RNDHTMLSDL SNGNNPQQLN  240
LPSGFGSSTG YPNQDISSIS QFDSVFRPDN FNGMSDQMFG VGGSSGGLFG SSSSSMPDFG  300
QLPTSTSASL SLSSSSIMSQ TLMKPELLRN NSNINKTHTN MLVGTSSLYS SDTKTDKSPH  360
PSAAMSATAL LQKAAQMGST RSTTAAAASN PFFGNNNTNN AATIPALLSS SSTSSRPSNI  420
SLNSLRPDNL RNNLTRDFLG ISNGDAPASG SSNPFSPNEL AKFAASAAAT GFTQFAGNH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03150.11e-105C2H2 family protein