PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0085s0080.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 481aa MW: 51964.9 Da PI: 9.8883

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0085s0080.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.2	2.9e-05	74	96	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H Kaladp0085s0080.1.p 74 FICEICNKGFQRDQNLQLHRRGH 96 89*******************88 PP
2	zf-C2H2	12.2	0.00056	151	173	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ Kaladp0085s0080.1.p 151 WKCDKCSKKYAVQSDWKAHSKTC 173 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MQHHMLSSSD DAFSVPNPSI RGFPPLQEND PIQNPKIDPN PVSNKKKRNL PGTPDPDAEV 60 IALSPKSLMA TNRFICEICN KGFQRDQNLQ LHRRGHNLPW KLKQRNNKEI PKKKVYICPE 120 KTCVHHDPSR ALGDLTGIKK HFSRKHGEKK WKCDKCSKKY AVQSDWKAHS KTCGTREYKC 180 DCGTLFSRKD SFITHRAFCD ALTEESARFA AQAASNNLSF RNDHTMLSDL SNGNNPQQLN 240 LPSGFGSSTG YPNQDISSIS QFDSVFRPDN FNAGMSDQMF GVGGSSGGLF GSSSSSMPDF 300 GQLPTSTSAS LSLSSSSIMS QTLMKPELLR NNSNINKTHT NMLVGTSSLY SSDTKTDKSP 360 HPSAAMSATA LLQKAAQMGS TRSTTAAAAS NPFFGNNNTN NAATIPALLS SSSTSSRPSN 420 ISLNSLRPDN LRNNLTRDFL GISNGDAPAS GSSNPFSPNE LAKFAASAAA TGFTQFAGNH 480 *

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MQHHMLSSSD DAFSVPNPSI RGFPPLQEND PIQNPKIDPN PVSNKKKRNL PGTPDPDAEV  60
IALSPKSLMA TNRFICEICN KGFQRDQNLQ LHRRGHNLPW KLKQRNNKEI PKKKVYICPE  120
KTCVHHDPSR ALGDLTGIKK HFSRKHGEKK WKCDKCSKKY AVQSDWKAHS KTCGTREYKC  180
DCGTLFSRKD SFITHRAFCD ALTEESARFA AQAASNNLSF RNDHTMLSDL SNGNNPQQLN  240
LPSGFGSSTG YPNQDISSIS QFDSVFRPDN FNAGMSDQMF GVGGSSGGLF GSSSSSMPDF  300
GQLPTSTSAS LSLSSSSIMS QTLMKPELLR NNSNINKTHT NMLVGTSSLY SSDTKTDKSP  360
HPSAAMSATA LLQKAAQMGS TRSTTAAAAS NPFFGNNNTN NAATIPALLS SSSTSSRPSN  420
ISLNSLRPDN LRNNLTRDFL GISNGDAPAS GSSNPFSPNE LAKFAASAAA TGFTQFAGNH  480
*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03150.1	1e-105	C2H2 family protein