PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0085s0007.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 493aa MW: 53453.1 Da PI: 9.9692

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0085s0007.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.3	5.6e-05	80	102	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H Kaladp0085s0007.1.p 80 FICEICKKGFQRDQNLQLHRRGH 102 89*******************88 PP
2	zf-C2H2	12.1	0.00058	157	179	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ Kaladp0085s0007.1.p 157 WKCDKCSKKYAVQSDWKAHSKTC 179 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MSTNMQRMLS ASDGGTCFPI PSHSIRGFPP TLLENDPNQN PKLDPNPVSN KKKRNLPGTP 60 DPDAEVIALS PKSLMATNRF ICEICKKGFQ RDQNLQLHRR GHNLPWKLKQ RNNKEIPKKK 120 VYICPEKTCV HHDPSRALGD LTGIKKHFSR KHGEKKWKCD KCSKKYAVQS DWKAHSKTCG 180 TREYKCDCGT LFSRKDSFIT HRAFCDALTE ENARFAAKAA SNNLSFRNDT LPSDPNNIPH 240 SHNLQQLHLP AGFVISSAGY PNQDFSSISQ FDSVFRPDNF SGMSDQMFAM GCSGLFGSSF 300 MPDFGQLPTS TIASLSLSSS SIMSQTLMKP PELLRSNSDV NRTHTNMLVG TSVAGTSLYS 360 SDPNSTKPSH HSAAMSATAL LQKAAQMGST RSTTTAANNT FLSKNNAIPD ATTIPAPISS 420 SSTSSRPSNI SVNSLRPDNL RNGLTRDFLG ISNGEAPAGG SSNPFSPHQP ADKFAASTVA 480 TGFSSQLTGG NH*

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MSTNMQRMLS ASDGGTCFPI PSHSIRGFPP TLLENDPNQN PKLDPNPVSN KKKRNLPGTP  60
DPDAEVIALS PKSLMATNRF ICEICKKGFQ RDQNLQLHRR GHNLPWKLKQ RNNKEIPKKK  120
VYICPEKTCV HHDPSRALGD LTGIKKHFSR KHGEKKWKCD KCSKKYAVQS DWKAHSKTCG  180
TREYKCDCGT LFSRKDSFIT HRAFCDALTE ENARFAAKAA SNNLSFRNDT LPSDPNNIPH  240
SHNLQQLHLP AGFVISSAGY PNQDFSSISQ FDSVFRPDNF SGMSDQMFAM GCSGLFGSSF  300
MPDFGQLPTS TIASLSLSSS SIMSQTLMKP PELLRSNSDV NRTHTNMLVG TSVAGTSLYS  360
SDPNSTKPSH HSAAMSATAL LQKAAQMGST RSTTTAANNT FLSKNNAIPD ATTIPAPISS  420
SSTSSRPSNI SVNSLRPDNL RNGLTRDFLG ISNGEAPAGG SSNPFSPHQP ADKFAASTVA  480
TGFSSQLTGG NH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03150.1	1e-104	C2H2 family protein