PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0083s0058.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 737aa    MW: 83098.9 Da    PI: 6.4749
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0083s0058.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS375.18.7e-1153627331374
                 GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90 
                          l++lL+ cA+av+++d++   +lL+++++++s++gd mqR+a+yf+++L+arla+s++  y+++  ++ s    +++l+a++++  +sP+
  Kaladp0083s0058.2.p 362 LRTLLTLCAQAVAANDQRGSMELLKQIRQHSSETGDGMQRMAHYFANGLEARLAGSGTPFYRTMLHRNRS---AADVLKAYHMYLAISPF 448
                          5789**********************************************************99999998...9**************** PP

                 GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfef 178
                           k+s++ aN++I++ +e+++++HiiDf+i+ G+QWp+L+q L++Rp+gpp++ iTg++ p++g   ++++ etg+rLa++Ae+++vpfe+
  Kaladp0083s0058.2.p 449 RKMSNFFANKTIMQVAENKTKLHIIDFGIQFGFQWPCLIQRLSARPGGPPKIHITGIDFPQPGfrPADKVDETGRRLANYAESFDVPFEY 538
                          **************************************************************9*************************** PP

                 GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalf 268
                          n  +ak++e++++++L+++ +E+l+Vn+ +++ ++ldesv+++s+r++v+kl+++++P+++++   +  +n++ F  rf e++ +ys+l+
  Kaladp0083s0058.2.p 539 NG-IAKEWETITTDDLKLRDDEVLVVNCLFNMRNVLDESVKVDSPRNAVMKLIRKTNPTIFIHGVVNGTYNAPFFISRFRESVFHYSSLY 627
                          **.7************************************************************************************** PP

                 GRAS 269 dsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgsl 358
                          d+le+++pr+  er  +E+e++gre++nvvaceg+er+er et ++W+ r  +aGF p+pl+e+++  ak  ++ ++ + +++ e+ ++l
  Kaladp0083s0058.2.p 628 DMLETNIPRDIPERLLIEKEIFGRELMNVVACEGSERTERPETCKQWQVRTLRAGFVPLPLNEEIMRLAKERVKSCYHKDFMIGEDGNWL 717
                          *****************************************************************************889********** PP

                 GRAS 359 vlgWkdrpLvsvSaWr 374
                          ++gWk+r  + +S+Wr
  Kaladp0083s0058.2.p 718 IQGWKGRIAYGLSSWR 733
                          ***************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 737 aa     Download sequence    
MVMDQGVTGY FDSMKGLDMN ELIKALPDQN LLYGINSHSN AFPVAPDSRN SGYETKMGFQ  60
AGVECQEDCD FSDIVLKYIS QILMEENLEE KKYLEEQESA ALLAAEKSLY EAIGKTHPTA  120
LEHVLTQTAD TNVGESSNSN TTSGVFDYSS CSSGSPVEPL EQILNFEVAE CQHLSSTSVS  180
SSQSSFNSYS STGYVGNRLA VSPINTLVEH HMLDEQSTRR FAKGLMGTNK SFPTEDHSFS  240
SCLYSEWLLK SSKDVMIKDE EKNEHGYSAH GRKSRKSSHP KDNFMDEERN NKMSATYNET  300
VLRTEMFDMV LLNCGTEAAE RESALREALL NEANKNGQQN VQAKGAKGRG KKSKSKRELV  360
DLRTLLTLCA QAVAANDQRG SMELLKQIRQ HSSETGDGMQ RMAHYFANGL EARLAGSGTP  420
FYRTMLHRNR SAADVLKAYH MYLAISPFRK MSNFFANKTI MQVAENKTKL HIIDFGIQFG  480
FQWPCLIQRL SARPGGPPKI HITGIDFPQP GFRPADKVDE TGRRLANYAE SFDVPFEYNG  540
IAKEWETITT DDLKLRDDEV LVVNCLFNMR NVLDESVKVD SPRNAVMKLI RKTNPTIFIH  600
GVVNGTYNAP FFISRFRESV FHYSSLYDML ETNIPRDIPE RLLIEKEIFG RELMNVVACE  660
GSERTERPET CKQWQVRTLR AGFVPLPLNE EIMRLAKERV KSCYHKDFMI GEDGNWLIQG  720
WKGRIAYGLS SWRPAN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-174GRAS family protein