PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0082s0179.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 260aa    MW: 28176.6 Da    PI: 10.0473
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0082s0179.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.00017092123
                         EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                         y+C+ C++ F++   L  H+++H
  Kaladp0082s0179.1.p 70 YVCSFCKREFRSAQALGGHMNVH 92
                         9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MDNKIGIPLT NINNRSKEYN EESAVGANTN KKGHMKGPWN HFYTSSVYAS EEGHMGLGVS  60
HGLSWPPRLY VCSFCKREFR SAQALGGHMN VHRRDRARLR QSPPSPPMEQ VAGICPSATT  120
ASADSINLNL IPNPNPSLIY SSTWMIQKPN IKTASFITGS PTIPARKPSA PYLISSSSSG  180
APASRIKRWS GARTNPFTTS TTTTTPNLFN ANNDEHQKNI SEVSLNRACE KGGLLRLGFG  240
NGGLSNEDVD LELRLGYSS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.17e-21C2H2 family protein