PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0082s0111.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Protein Properties

Length: 431aa MW: 47985.5 Da PI: 8.8938

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0082s0111.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	51.3	2.2e-16	84	167	6	94
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 +++d ++++ l lp+kf++++g + ++ ++l+ ++ +W+v++ +k+s++++l+kGW +F+++ g++ g f+vF +d + f +v Kaladp0082s0111.1.p 84 ITADITTRSKLKLPRKFVKRYGANVPR--NVRLQVPTRAEWRVEV--KKNSDGVWLGKGWVKFAESLGIRYGHFLVFDYDVVhDVF--HV 167 5789999999*********888555..6***********..*****************************98653555..55 PP
2	B3	59.9	4.3e-19	345	428	14	99
T-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 14 grlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 g + +p +f++++ +++ k+ tl++e+grsW vk+++ k + + ++t+GWk+F+ + +Lk+gD+++F+l+g e l+v +fr+ Kaladp0082s0111.1.p 345 GPVLVPASFIQAYfNLN---IKDATLRTEDGRSWLVKYNVAKDRHESYFTSGWKKFAIDTDLKTGDVCLFELIGGAENALKVVIFRA 428 556789999996444...2489**********999999999************************99777799999985 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MALLRARHSM NYGVGCQSCQ LLSTYYVTHA CNYIIVGHYD GSCLHNDGQK RSVTAGELTS 60 RITQQGHHYK EEGLASPMKF FRIITADITT RSKLKLPRKF VKRYGANVPR NVRLQVPTRA 120 EWRVEVKKNS DGVWLGKGWV KFAESLGIRY GHFLVFDYDV VHDVFHVLAL DMSAVEIEYP 180 TVSSIDDNEE EDLNGSRFAL KRPKVEDEDG DVVIVNKDGA NLGSKRRASA GQAPRGEPAS 240 KKATPSKVDQ NTCGNVIVRT EDEKLKTDRN TLQIQRGCYG RETMLNSEGR IRCVVQGRRN 300 GYGEQTKIAL ERAKAFKAEE PVCIITLPPS CVGQESPAGA ATNQGPVLVP ASFIQAYFNL 360 NIKDATLRTE DGRSWLVKYN VAKDRHESYF TSGWKKFAID TDLKTGDVCL FELIGGAENA 420 LKVVIFRALD *

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MALLRARHSM NYGVGCQSCQ LLSTYYVTHA CNYIIVGHYD GSCLHNDGQK RSVTAGELTS  60
RITQQGHHYK EEGLASPMKF FRIITADITT RSKLKLPRKF VKRYGANVPR NVRLQVPTRA  120
EWRVEVKKNS DGVWLGKGWV KFAESLGIRY GHFLVFDYDV VHDVFHVLAL DMSAVEIEYP  180
TVSSIDDNEE EDLNGSRFAL KRPKVEDEDG DVVIVNKDGA NLGSKRRASA GQAPRGEPAS  240
KKATPSKVDQ NTCGNVIVRT EDEKLKTDRN TLQIQRGCYG RETMLNSEGR IRCVVQGRRN  300
GYGEQTKIAL ERAKAFKAEE PVCIITLPPS CVGQESPAGA ATNQGPVLVP ASFIQAYFNL  360
NIKDATLRTE DGRSWLVKYN VAKDRHESYF TSGWKKFAID TDLKTGDVCL FELIGGAENA  420
LKVVIFRALD *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-17	B3 family protein