PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0082s0090.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 359aa    MW: 39929.5 Da    PI: 9.4316
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0082s0090.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.71.6e-16790694
                         ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
                   B3  6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94
                         +++d ++++ l lp+kf++++g + ++   ++l+ ++  +W+v++  +k+s++++l+kGW +F+++ g++ g f+vF +d   + f  +v
  Kaladp0082s0090.1.p  7 ITADITTRSKLKLPRKFVKRYGANVPR--NVRLQVPTRAEWRVEV--KKNSDGVWLGKGWVKFAESLGIRYGHFLVFDYDVVhDVF--HV 90
                         5789999999***********888555..6***************..*******************************98653555..55 PP
2B359.75.2e-192673501499
                          T-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                   B3  14 grlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                          g + +p +f++++ +++    k+ tl++++grsW vk++  k++ + ++t+GWk+F+ + +Lk+gD+++F+l+g  e  l+v +fr+
  Kaladp0082s0090.1.p 267 GPVLVPSSFIQAYfNLS---IKDATLRTKDGRSWLVKYNLAKGRHESYFTSGWKQFAIDTDLKTGDVCLFELIGGAENALKVVIFRA 350
                          5567899***9996333...3589**************999999999**************************99777799999985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MKFFRIITAD ITTRSKLKLP RKFVKRYGAN VPRNVRLQVP TRAEWRVEVK KNSDGVWLGK  60
GWVKFAESLG IRYGHFLVFD YDVVHDVFHV LALDMSAVEI EYPTVSSIDD NEEEDLSGSR  120
FALKRPKVEH EDGDVVIVNK DGANLGNKRR AAGQAPSGEP ASKKATPSKV DQNTCGNVIV  180
RTDGEKLKTD RNTLQIQRGC YGRETMLSSE GRIRCVVQGR RNGYGEQTKI ALERAKAFKA  240
EEPVCIITLP PSCVGQESPA GAATNQGPVL VPSSFIQAYF NLSIKDATLR TKDGRSWLVK  300
YNLAKGRHES YFTSGWKQFA IDTDLKTGDV CLFELIGGAE NALKVVIFRA MDEDRVPE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-18B3 family protein