PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0081s0357.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Trihelix | ||||||||
Protein Properties | Length: 857aa MW: 95014.2 Da PI: 8.6153 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 69.6 | 6e-22 | 768 | 848 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+ +e++ Li++r e++e+++ +k++++lWee+s+++ ++gf r+p qCk+ w +l ++y++ k g++++ +++pyfd+++ Kaladp0081s0357.2.p 768 RWKTEEIKMLIKMRGELHEQFQVAKRRMALWEEISANLVSGGFDRTPGQCKSLWTSLVQKYEESKSGKRSK-----TSWPYFDDVD 848 8********************************************************************85.....36*****987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 857 aa Download sequence |
MATFAALSMC PCSLPCRPRV GRRSIWCSVV STPALGTQGS KAPRKRSPRL EGVGKSMEDS 60 IQRKMEQFYE GANGPPIRVL PIGGLGEIGM NCMLIGNYDR YILIDAGVMF PDFDELGVQK 120 IIPDTTFIKR WSHKIEAVII THGHEDHIGA LPWVIPALDP DTPIFASSFT MELIKKRLKE 180 FGIFVPSRLK VFRTKSKFKA GPFEIEPIRV THSIPDCSGL VLRCADGTIL HTGDWKIDES 240 PLDGKAFDRE ALEQLSKEGV TLMMSDSTNV LSPGRTTSES NVKTALMRHI SATKGRVITT 300 QFASNIHRLG SVKAAADLTG RKLVFVGMSL RTYLDAAWKD GKAPIDPSTL VKAEDIDAFA 360 PKDLLIVTTG SQGEPRAALN LASYGSSHSL KLTKEDVILY SAKVIPGNES RVMKMLNRIS 420 DIGSTIVMGR NEGLHTSGHA YREELEEVLR IVKPQHFLPI HGELLFLREH EMLGKFTGIH 480 HTTVIKNGEM LGVSHLRNRR VLSNGYISLG KENLQLMYSD GDKAFGTSTD LCIDERLRIA 540 SDGIIVISME IMRPQNGAID RSIKGKIKIT TRCLWLDKGK LLDALYKAAH AALSSCPVNC 600 PLVHMERTVS EVLRKMVRKY SSKRPEVIAV AIENPSAVLV DEISSKLSGK SNFGFKIPGA 660 RDFVDENPNK SWSNPRQEAD GEEVRFAEKI LQPELRDVTA RVERLLPEEE LATSSSLVEE 720 IIPSASAKAD QFWKAYVTSP SEEAGTSEDE SESSDTEIKS SKSVKRNRWK TEEIKMLIKM 780 RGELHEQFQV AKRRMALWEE ISANLVSGGF DRTPGQCKSL WTSLVQKYEE SKSGKRSKTS 840 WPYFDDVDAV LSNATN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63420.1 | 0.0 | Trihelix family protein |