PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0081s0357.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 858aa MW: 95142.3 Da PI: 8.6153

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0081s0357.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	69	9.3e-22	768	849	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+ +e++ Li++r e++e+++ +k++++lWee+s+++ ++gf r+p qCk+ w +l ++y+++ ++ k+ s++ ++pyfd+++ Kaladp0081s0357.1.p 768 RWKTEEIKMLIKMRGELHEQFQVAKRRMALWEEISANLVSGGFDRTPGQCKSLWTSLVQKYEQESKSGKR--SKT--SWPYFDDVD 849 8************************************************************9999997..344..5***987 PP

Sequence ? help Back to Top
Protein Sequence Length: 858 aa Download sequence
MATFAALSMC PCSLPCRPRV GRRSIWCSVV STPALGTQGS KAPRKRSPRL EGVGKSMEDS 60 IQRKMEQFYE GANGPPIRVL PIGGLGEIGM NCMLIGNYDR YILIDAGVMF PDFDELGVQK 120 IIPDTTFIKR WSHKIEAVII THGHEDHIGA LPWVIPALDP DTPIFASSFT MELIKKRLKE 180 FGIFVPSRLK VFRTKSKFKA GPFEIEPIRV THSIPDCSGL VLRCADGTIL HTGDWKIDES 240 PLDGKAFDRE ALEQLSKEGV TLMMSDSTNV LSPGRTTSES NVKTALMRHI SATKGRVITT 300 QFASNIHRLG SVKAAADLTG RKLVFVGMSL RTYLDAAWKD GKAPIDPSTL VKAEDIDAFA 360 PKDLLIVTTG SQGEPRAALN LASYGSSHSL KLTKEDVILY SAKVIPGNES RVMKMLNRIS 420 DIGSTIVMGR NEGLHTSGHA YREELEEVLR IVKPQHFLPI HGELLFLREH EMLGKFTGIH 480 HTTVIKNGEM LGVSHLRNRR VLSNGYISLG KENLQLMYSD GDKAFGTSTD LCIDERLRIA 540 SDGIIVISME IMRPQNGAID RSIKGKIKIT TRCLWLDKGK LLDALYKAAH AALSSCPVNC 600 PLVHMERTVS EVLRKMVRKY SSKRPEVIAV AIENPSAVLV DEISSKLSGK SNFGFKIPGA 660 RDFVDENPNK SWSNPRQEAD GEEVRFAEKI LQPELRDVTA RVERLLPEEE LATSSSLVEE 720 IIPSASAKAD QFWKAYVTSP SEEAGTSEDE SESSDTEIKS SKSVKRNRWK TEEIKMLIKM 780 RGELHEQFQV AKRRMALWEE ISANLVSGGF DRTPGQCKSL WTSLVQKYEQ ESKSGKRSKT 840 SWPYFDDVDA VLSNATN*

Sequence ? help Back to Top

Protein Sequence Length: 858 aa Download sequence

MATFAALSMC PCSLPCRPRV GRRSIWCSVV STPALGTQGS KAPRKRSPRL EGVGKSMEDS  60
IQRKMEQFYE GANGPPIRVL PIGGLGEIGM NCMLIGNYDR YILIDAGVMF PDFDELGVQK  120
IIPDTTFIKR WSHKIEAVII THGHEDHIGA LPWVIPALDP DTPIFASSFT MELIKKRLKE  180
FGIFVPSRLK VFRTKSKFKA GPFEIEPIRV THSIPDCSGL VLRCADGTIL HTGDWKIDES  240
PLDGKAFDRE ALEQLSKEGV TLMMSDSTNV LSPGRTTSES NVKTALMRHI SATKGRVITT  300
QFASNIHRLG SVKAAADLTG RKLVFVGMSL RTYLDAAWKD GKAPIDPSTL VKAEDIDAFA  360
PKDLLIVTTG SQGEPRAALN LASYGSSHSL KLTKEDVILY SAKVIPGNES RVMKMLNRIS  420
DIGSTIVMGR NEGLHTSGHA YREELEEVLR IVKPQHFLPI HGELLFLREH EMLGKFTGIH  480
HTTVIKNGEM LGVSHLRNRR VLSNGYISLG KENLQLMYSD GDKAFGTSTD LCIDERLRIA  540
SDGIIVISME IMRPQNGAID RSIKGKIKIT TRCLWLDKGK LLDALYKAAH AALSSCPVNC  600
PLVHMERTVS EVLRKMVRKY SSKRPEVIAV AIENPSAVLV DEISSKLSGK SNFGFKIPGA  660
RDFVDENPNK SWSNPRQEAD GEEVRFAEKI LQPELRDVTA RVERLLPEEE LATSSSLVEE  720
IIPSASAKAD QFWKAYVTSP SEEAGTSEDE SESSDTEIKS SKSVKRNRWK TEEIKMLIKM  780
RGELHEQFQV AKRRMALWEE ISANLVSGGF DRTPGQCKSL WTSLVQKYEQ ESKSGKRSKT  840
SWPYFDDVDA VLSNATN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein