PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0081s0319.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ARR-B | ||||||||
Protein Properties | Length: 600aa MW: 65538.5 Da PI: 6.6307 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 89.3 | 3.6e-28 | 201 | 254 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av++L G++kA+Pk+ilelm+v+ Lt+e+v+SHLQkYRl Kaladp0081s0319.1.p 201 KPRVVWSIELHRKFVAAVNHL-GIDKAVPKRILELMNVEKLTRENVASHLQKYRL 254 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 34.6 | 4.4e-11 | 203 | 253 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+ lG + +k+I + m+ +++t++++ s++qky+ Kaladp0081s0319.1.p 203 RVVWSIELHRKFVAAVNHLGIDkaVPKRILELMNvEKLTRENVASHLQKYR 253 678********************************99*************7 PP | |||||||
3 | Response_reg | 71.6 | 3.2e-24 | 20 | 126 | 1 | 107 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedale 88 vl vdD+p+ + ll+ +l+k +y +v++ +++ +al+ll++ + +Dl++ D+ mp+mdG++ll++ e lp+i+++a+g+++++ + Kaladp0081s0319.1.p 20 VLAVDDDPTCLLLLEGLLRKCKY-HVTTRTHAIAALNLLRDDNnrFDLVISDVHMPDMDGFKLLEQVGLEM-GLPVIMLSAYGDPKLVMK 107 799********************.***************777667**********************6644.8***************** PP HHHTTESEEEESS--HHHH CS Response_reg 89 alkaGakdflsKpfdpeel 107 + Ga d+l Kp+ +eel Kaladp0081s0319.1.p 108 GITHGACDYLLKPVRIEEL 126 *****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 600 aa Download sequence |
MTIEQRIEEP ADQFPVGMRV LAVDDDPTCL LLLEGLLRKC KYHVTTRTHA IAALNLLRDD 60 NNRFDLVISD VHMPDMDGFK LLEQVGLEMG LPVIMLSAYG DPKLVMKGIT HGACDYLLKP 120 VRIEELQIIW QHVIRKKRVD PKDHKSADNT HYGNTEAGQA GAGNGYPDQK SNKKRKDQVE 180 DEDEDHDDNE LENDDPSAQK KPRVVWSIEL HRKFVAAVNH LGIDKAVPKR ILELMNVEKL 240 TRENVASHLQ KYRLYLRRIS CVQSQQANMA AAFGTTDPAS YLRVNGMGGF NSLSGSPQFQ 300 NSAAFRSFQP NGMLGRLNSP ASLGGIQRLP SQFSGFSEQG VTLIPGNSTG CILKGMPMPM 360 PTSFELDQLQ DSNNRNATAK VDDLAVFPVT SGLPDVKKTA AGGLSGPHLP PPTSTLMLEG 420 HPVQSHSRVG IGNQSAAVFG SLTPDLSSHF SDRARGSDNW PVAIQSSTGH SDSYASYSGP 480 QHVNSHLDDG ASVTELPLSV TDYQYGSHSD IKPTWDSFAT AAAPIYSSSH STTVAYTNLR 540 RVTNARSEFH AIEANYTVEN SATSAPSANF KRGYPNKPQT YQLPNSVGSL EDLVSSMMK* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 135 | 176 | RKKRVDPKDHKSADNTHYGNTEAGQAGAGNGYPDQKSNKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-127 | ARR-B family protein |