PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0081s0236.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 298aa    MW: 31868.7 Da    PI: 4.5529
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0081s0236.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.00012272294223
                          EETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                          +C+ C+k+F++   L++H +  H
  Kaladp0081s0236.1.p 272 TCGSCSKTFNSDKALESHSKAkH 294
                          7*****************88777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MEFWGVEVKA GQPLKVSPGE GKVIHLSQAS IGESKKGKDE SVPVYVKIGE QKLVIGTLSA  60
DKHPQIQYDV VFEKDFELSH NWKSGSIFFC GYRTQNPGDD EGFSGDEFDS DSEDEELPIE  120
NGKPELVNVA AAAKPAAADK AKISVQEAAK EAKADSDEDS SDDEDFSDSD DEDISDDGDE  180
KMGEGDSDDE EDSSEEDEKT PTPKKENKKR PTEPENKTPV PSKKAKIATP QKTDGKKAAA  240
HTATPHPAKQ AGKTPKSENP KTPATGGKSS VTCGSCSKTF NSDKALESHS KAKHAAK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.21e-37C2H2 family protein