PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0081s0148.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | GATA | ||||||||
Protein Properties | Length: 276aa MW: 30182 Da PI: 7.6081 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 48.4 | 1.2e-15 | 217 | 251 | 1 | 33 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkk 33 C nCgt + Tp++Rrgp+g++tLCnaCGl+++ k Kaladp0081s0148.1.p 217 CKNCGTGSkhTPMMRRGPEGPRTLCNACGLKWANK 251 ******9999**********************875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence |
MSSDYSNESI NMQTLMDNAD EDAFVDGEEF ADSGVAGQFE HHLVGDDGVR DGAFTDPIDA 60 VHPHRHSMSA PPPGVDFSTA CSPSQLTLSF HGEVYVFDDV SAEKVQAVLL LLGGYEVPGG 120 DHTGLKPQNQ RSAGDVYGRA MTPTLRAAAL RRFREKKKDR CFEKKIRYTV RKEVAHRMKR 180 NKGQFVSSKA SSEDIGSGSS DGNAYPGAVK EEHETSCKNC GTGSKHTPMM RRGPEGPRTL 240 CNACGLKWAN KVRSRRHPLS PTRVLELFLL VMILL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 151 | 159 | RRFREKKKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51600.2 | 4e-53 | GATA family protein |