PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0081s0001.4.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 276aa MW: 31274.6 Da PI: 8.6471

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0081s0001.4.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.5	0.0001	2	24	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp C+ s++rk++L+rH+ H Kaladp0081s0001.4.p 2 CPvdGCHSSYRRKDHLTRHLLQH 24 9999***************9887 PP
2	zf-C2H2	17.2	1.4e-05	66	90	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ Cgk F+ s L++H +H Kaladp0081s0001.4.p 66 HVCQedGCGKAFRFASKLQKHELSH 90 789999***************9998 PP
3	zf-C2H2	15.5	4.8e-05	157	181	2	23
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC+ C +Fs++snL++H + H Kaladp0081s0001.4.p 157 KCNfeGCLHTFSNRSNLQQHVKAvH 181 699999**************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MCPVDGCHSS YRRKDHLTRH LLQHEGNVFK CSNEKCARQF VSQANLTRHK CHEPETPFSG 60 CASKQHVCQE DGCGKAFRFA SKLQKHELSH VKLETMEAIC LETGCLKYFS NEACLKAHMD 120 ACHQHINCEV CGSKQLKKNL KRHLRTHEPG HANEPVKCNF EGCLHTFSNR SNLQQHVKAV 180 HLNIKRFACG YADCGMKFAY KHVRDNHEKT SHHVYTQGDF LESLEHCRVT PCGGRKRKCP 240 SIASVLVKRI TPHPKDSDST ASSMYSAWMN VTNSE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.1	6e-77	C2H2 family protein