PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0079s0139.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 591aa MW: 65673.2 Da PI: 6.0866

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0079s0139.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.3	7.4e-18	23	70	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEd llv+ vk++G ++W+t+ ++ g+ R++k+c++rw+++l Kaladp0079s0139.1.p 23 KGPWKPEEDMLLVEFVKKHGERDWNTVRKHSGLARCGKSCRLRWNNHL 70 79********************************************97 PP
2	Myb_DNA-binding	45.9	1.3e-14	76	119	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+ +++E++l+ +++ q G++ W++Ia++++ gRt++++k++w++ Kaladp0079s0139.1.p 76 KGPISPDEEKLICQLHSQIGNK-WARIAAMLP-GRTDNEIKNFWNT 119 6889****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence
MVAKGRDEKL GSTSSSSWAE LKKGPWKPEE DMLLVEFVKK HGERDWNTVR KHSGLARCGK 60 SCRLRWNNHL RPNLRKGPIS PDEEKLICQL HSQIGNKWAR IAAMLPGRTD NEIKNFWNTR 120 IKRLSRKGVP LYPPEIQSPR PDLLNPYLHH LDPQNNHSSS SPSTSSSSTL QSNYQTPTLL 180 SPTTPTSHSL LFPSQPQQFH DYDDVVLHDS MAMYDAALEN SRHHQQMLAS AMMNSMATQP 240 PLPSSSFQRF KRQRSIPNLT IPVRHVALHP FSPLGLSTSS SPLGRSVSMA GSPTASTTYM 300 HVASAPHSYA SSPTGMVLSP TALQLGVSNP HPTMRLPLSS PPIVTCRPTY LPRTSSFAFD 360 PMLFDLNPAT THAHHHMQTM DDAIDNELSF SVEDLGILMD PETTISPNTC SSSHINEPQQ 420 NGLVPAADRN NAGPLEEFLK EAETISIRDV EEAEFSTEQA HAFLNELESD MEESRLNCSS 480 SGQALMDQPE AQLAVRECQM ESMAELELNN ELANLLEANP LGHSFWSNGN DNDWLANSQF 540 SQPSNDHHQQ QQYQINHFMD DKYGYGDASA DYSSMPVAAS SSWDNMPGIY *

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence

MVAKGRDEKL GSTSSSSWAE LKKGPWKPEE DMLLVEFVKK HGERDWNTVR KHSGLARCGK  60
SCRLRWNNHL RPNLRKGPIS PDEEKLICQL HSQIGNKWAR IAAMLPGRTD NEIKNFWNTR  120
IKRLSRKGVP LYPPEIQSPR PDLLNPYLHH LDPQNNHSSS SPSTSSSSTL QSNYQTPTLL  180
SPTTPTSHSL LFPSQPQQFH DYDDVVLHDS MAMYDAALEN SRHHQQMLAS AMMNSMATQP  240
PLPSSSFQRF KRQRSIPNLT IPVRHVALHP FSPLGLSTSS SPLGRSVSMA GSPTASTTYM  300
HVASAPHSYA SSPTGMVLSP TALQLGVSNP HPTMRLPLSS PPIVTCRPTY LPRTSSFAFD  360
PMLFDLNPAT THAHHHMQTM DDAIDNELSF SVEDLGILMD PETTISPNTC SSSHINEPQQ  420
NGLVPAADRN NAGPLEEFLK EAETISIRDV EEAEFSTEQA HAFLNELESD MEESRLNCSS  480
SGQALMDQPE AQLAVRECQM ESMAELELNN ELANLLEANP LGHSFWSNGN DNDWLANSQF  540
SQPSNDHHQQ QQYQINHFMD DKYGYGDASA DYSSMPVAAS SSWDNMPGIY *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26930.1	2e-56	MYB family protein