PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0076s0345.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 451aa MW: 50098 Da PI: 7.8245

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0076s0345.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	52.7	1.1e-16	18	109	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 +W+++ + +L++a ++ +l+rg+l++++W+ev++++ ++++ r+ +qCk++++ ++k+yk +k++++ + ++s++p+fd+l Kaladp0076s0345.1.p 18 CWSEEATSTLVDAWGRRYVELSRGNLRQKDWQEVADAVnarhgHSKKTFRTDVQCKNRIDTIKKKYKTEKARASATNGAVVSSWPFFDRL 107 7***********************************988877778889*********************9999********9 PP trihelix 86 ea 87 +a Kaladp0076s0345.1.p 108 DA 109 85 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MDESSPPPSR PIPVREDCWS EEATSTLVDA WGRRYVELSR GNLRQKDWQE VADAVNARHG 60 HSKKTFRTDV QCKNRIDTIK KKYKTEKARA SATNGAVVSS WPFFDRLDAL IGPNVKKVGS 120 GGGGGQVVMR IASPPMALPL TAYRKAVQPR TSPPMATVTP VTLPKKRGAA AASMDDSYFR 180 RNYSAVAAAA AAAEVDEQEE EESEERMAEE EDSSRSSGDG EGDGDGIKKL ARAIKRFGEI 240 YARVEGEKQR QMVELEKQRM QFAKELEVQR MQMFMNTQVQ LEKIKRSKGS GSNDMSGLVS 300 VSSMPDIPNY LTSLFLVDPQ THEVKLCDFG SAKVLIKGEL NISYICSRFY RAPELIFGAT 360 DYTTSVDLWS AGCVLGELLL GQELFPGDTS VDQLVKIIQV LGTPTREEIR CMNPTYTDHK 420 FPTIKAHPWH KVFDKRVPPE AIDLISRLLQ *

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MDESSPPPSR PIPVREDCWS EEATSTLVDA WGRRYVELSR GNLRQKDWQE VADAVNARHG  60
HSKKTFRTDV QCKNRIDTIK KKYKTEKARA SATNGAVVSS WPFFDRLDAL IGPNVKKVGS  120
GGGGGQVVMR IASPPMALPL TAYRKAVQPR TSPPMATVTP VTLPKKRGAA AASMDDSYFR  180
RNYSAVAAAA AAAEVDEQEE EESEERMAEE EDSSRSSGDG EGDGDGIKKL ARAIKRFGEI  240
YARVEGEKQR QMVELEKQRM QFAKELEVQR MQMFMNTQVQ LEKIKRSKGS GSNDMSGLVS  300
VSSMPDIPNY LTSLFLVDPQ THEVKLCDFG SAKVLIKGEL NISYICSRFY RAPELIFGAT  360
DYTTSVDLWS AGCVLGELLL GQELFPGDTS VDQLVKIIQV LGTPTREEIR CMNPTYTDHK  420
FPTIKAHPWH KVFDKRVPPE AIDLISRLLQ *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	2e-63	Trihelix family protein