PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0076s0339.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Protein Properties

Length: 817aa MW: 90363 Da PI: 7.4198

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0076s0339.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.3	2.8e-18	317	416	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+l+ sd+++ grlv+pkk+ae++ ++++e+ l+++d +gr+W +++++ +++s++yvl+ G ++ ++ +L +gD v+F++ + Kaladp0076s0339.1.p 317 FEKTLSASDAGRIGRLVVPKKCAEAYfpHISQPEGLPLKVQDVKGREWVFQFRFwpNNNSRMYVLE-GVTSYIQSMQLLAGDKVTFSRLE 405 99************************556667778***********99899999999.*******************766 PP SSEE..EEEEE- CS B3 87 rsefelvvkvfr 98 e++lv+++++ Kaladp0076s0339.1.p 406 -PEGKLVMGFRK 416 .77777777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 817 aa Download sequence
MAARTCFNRS CTEVKSTRSS NGWRLSTGEY SILCDRCASL YEDGRFCEVF HSQAPGWVPC 60 QSCNKHIHCG CIVSSHTFML LDAGGIECIT CAKRSGRPIQ PGNLSYPPPP PLPHGVHRSP 120 FSERIRDLST KSWSQFSGVG PMQWREAPNL YNSFLAQSEA NTRVPCDIGI SNALIKNKSN 180 EDFSLSFLEK KIQRETDWSM RRIDRNSGAP MEMSSSKEDL STLRLEHVLI NSSANESNSG 240 IAASGSLLRA APSSETPNSL HSIYSSEVDP SCKTPTQNGR SHADGKSKNQ LLIRYLPRTT 300 DEELQKIAGS SEIKPLFEKT LSASDAGRIG RLVVPKKCAE AYFPHISQPE GLPLKVQDVK 360 GREWVFQFRF WPNNNSRMYV LEGVTSYIQS MQLLAGDKVT FSRLEPEGKL VMGFRKASKG 420 STDLGEHPNK ISNNGDSNAG INLNLSNADK SGYIAKDVTN VKSSVSRKRK NSSIFSKDRH 480 LLLESMDLYE LKITLEEAQR LIRPSPNHLS RVVIVENEIE EYEDCPVIGK PTVFTTDQMG 540 KSIQWAQCED CLKWRRLSAD VLLPAKWTCS ENYSDLERSS CSSPQDISAE HLADLLFSKN 600 QSASKKIKVT HQEVDTIEAV EGLDALANLA ILGEGQAVTT KHPRHRIGCS CIVCIQPPSG 660 KGRKHKHTCD CTVCLTVKRR FQTLMLRREK KQQEKDAEAA SEKLQRCSSL LEKSLENDPL 720 TYDNSSASTP TLKEVTGDGS VDISCGNKSS ASPLKDQIDL NIKPERDDPV LSSELDTLRL 780 SYNAAEAVDQ MNSSIHGAVV EVADNPTQTV EVVEPL*

Sequence ? help Back to Top

Protein Sequence Length: 817 aa Download sequence

MAARTCFNRS CTEVKSTRSS NGWRLSTGEY SILCDRCASL YEDGRFCEVF HSQAPGWVPC  60
QSCNKHIHCG CIVSSHTFML LDAGGIECIT CAKRSGRPIQ PGNLSYPPPP PLPHGVHRSP  120
FSERIRDLST KSWSQFSGVG PMQWREAPNL YNSFLAQSEA NTRVPCDIGI SNALIKNKSN  180
EDFSLSFLEK KIQRETDWSM RRIDRNSGAP MEMSSSKEDL STLRLEHVLI NSSANESNSG  240
IAASGSLLRA APSSETPNSL HSIYSSEVDP SCKTPTQNGR SHADGKSKNQ LLIRYLPRTT  300
DEELQKIAGS SEIKPLFEKT LSASDAGRIG RLVVPKKCAE AYFPHISQPE GLPLKVQDVK  360
GREWVFQFRF WPNNNSRMYV LEGVTSYIQS MQLLAGDKVT FSRLEPEGKL VMGFRKASKG  420
STDLGEHPNK ISNNGDSNAG INLNLSNADK SGYIAKDVTN VKSSVSRKRK NSSIFSKDRH  480
LLLESMDLYE LKITLEEAQR LIRPSPNHLS RVVIVENEIE EYEDCPVIGK PTVFTTDQMG  540
KSIQWAQCED CLKWRRLSAD VLLPAKWTCS ENYSDLERSS CSSPQDISAE HLADLLFSKN  600
QSASKKIKVT HQEVDTIEAV EGLDALANLA ILGEGQAVTT KHPRHRIGCS CIVCIQPPSG  660
KGRKHKHTCD CTVCLTVKRR FQTLMLRREK KQQEKDAEAA SEKLQRCSSL LEKSLENDPL  720
TYDNSSASTP TLKEVTGDGS VDISCGNKSS ASPLKDQIDL NIKPERDDPV LSSELDTLRL  780
SYNAAEAVDQ MNSSIHGAVV EVADNPTQTV EVVEPL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-133	B3 family protein