PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0076s0331.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Trihelix
Protein Properties Length: 291aa    MW: 32476.7 Da    PI: 6.9577
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0076s0331.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix38.43.2e-1218108186
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                          +Wt++   +L+ea  ++  +l+rg+l+ ++W++v++ +     + ++  r+ +qCk++++ ++k+yk +k++ +       s++p++++l
  Kaladp0076s0331.1.p  18 CWTEEASSTLVEAWARRFLDLNRGNLRLKDWQHVADLVnarhgHTKKTYRTDVQCKNRIDTIKKKYKVEKARVSASPGMLGSSWPFYERL 107
                          7*************************************988777778889*********************999986666779******9 PP

             trihelix  86 e 86 
                          +
  Kaladp0076s0331.1.p 108 D 108
                          8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MSDSATPSSR SVPVREDCWT EEASSTLVEA WARRFLDLNR GNLRLKDWQH VADLVNARHG  60
HTKKTYRTDV QCKNRIDTIK KKYKVEKARV SASPGMLGSS WPFYERLDEL IGSSLKKPPA  120
PPPAATVTVS DSLSHSPPMA LPLPFPYRKS APLATAVLPK KRASPMDDSY FRRNYSAVAA  180
AAAAAATADD DEDDEEVGEE DGDDDLVEGF RGDEDSEDGI RKLARAIRKF GDVYEKVEAE  240
KQTQMIEMEK QRMQLAKDLE VQRMQMFVNM QLQLKKIKIA KGNKSNGESI *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.16e-61Trihelix family protein