PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0076s0190.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 451aa    MW: 48533.8 Da    PI: 9.0845
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0076s0190.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.13.2e-055981123
                         EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                         ++C+ C+k F r  nL+ H r H
  Kaladp0076s0190.1.p 59 FVCEVCSKGFQRDQNLQLHRRGH 81
                         89*******************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    
MDNMTSSPPT ASGAGAEVSI SSAARNPPPK KRRNLPGMPD PNAVVISLSP QSLMATNRFV  60
CEVCSKGFQR DQNLQLHRRG HNLPWRLKQR NSEGEMRRKV YVCPEPSCIH HNPSRALGDL  120
TGIKKHYSRK HGEKKWKCDR CSKKYAVKSD CKAHMKTCGT REYKCDCGTL FSRRDSFITH  180
RAFCDALAEE NTKVQTAALI VDDTKPNEDM VVASSPTPPS PVTPAPTTIS PLLSFQSPDL  240
TDNSAVVTDQ SLATLAASSN SSRCTSYISG KISVFASIFA PSTETTSTSF SHFMSPLSQS  300
DHPLPPSSPK GDTGFNHPLT SPSLYLTCNS FAPFPMIPDL PPDHHHYASR SHKPIMSATA  360
LLQKAAQMGA TTSAGSSLLC GFSLAMPSSS SSTHQGQSAD TSSITQWSSH AKADNSVVTA  420
GLRLGLGFPA SDLYVQPTTL DLLGLTKTRH *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50700.14e-98C2H2 family protein