PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0075s0039.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 252aa MW: 28845.2 Da PI: 8.473 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.7 | 8.7e-16 | 8 | 55 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed ll ++v ++G ++W+ +a+ g++Rt+k+c++rw +yl Kaladp0075s0039.3.p 8 KGPWTEQEDFLLENVVGLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYL 55 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.6 | 2.1e-16 | 61 | 106 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T E+ l +++++++G++ W++Iar+++ gRt++++k++w++++ Kaladp0075s0039.3.p 61 RGKMTSTEERLVIELHAKWGNR-WSRIARRLP-GRTDNEIKNFWRTHM 106 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MQQEDTRKGP WTEQEDFLLE NVVGLFGDRR WDFVAKVSGL NRTGKSCRLR WVNYLHPGLK 60 RGKMTSTEER LVIELHAKWG NRWSRIARRL PGRTDNEIKN FWRTHMRKKA QERKRVNYLS 120 TTSSESESSP SSSNHTQGSR CDSGKESFYD TGGNATVTAM GKKQTDEEGE RIKVDDIWKD 180 IDTSKDTITP LNDGYNQGLC NYSCTPLVSP LWEFCPDSLW RMDEEDSKML TPSNNYLLAC 240 CEAGKSRLRG S* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46130.1 | 1e-88 | MYB family protein |