PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0074s0052.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 289aa    MW: 31538.2 Da    PI: 7.7657
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0074s0052.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.52.3e-162370148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         rg+WT eEdell +++++ G g W+t +++ g+ R++k+c++rw +yl
  Kaladp0074s0052.1.p 23 RGPWTSEEDELLTKCINKEGEGKWRTLPERAGLARCGKSCRLRWMNYL 70
                         89********************************************97 PP
2Myb_DNA-binding46.67.8e-1581121648
                          HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l
  Kaladp0074s0052.1.p  81 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNSHL 121
                          89***************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MRNPSSSVTE KKSSGGRKMG LKRGPWTSEE DELLTKCINK EGEGKWRTLP ERAGLARCGK  60
SCRLRWMNYL RPCVKRGQIA PDEEDLILRL HRLLGNRWSL IAGRIPGRTD NEIKNYWNSH  120
LSKKLISQGI DPKTHKPLVE TSSTRAITKS LGAAKNGRRS ESDNSGSSKM VTTTPPTSSG  180
QNPNMYQHHF GSAVDGLEDD QMMTRGGHGN AAASDAQESA GCYYSAGQCC ETNLHLEDGA  240
DAGGYHVNLQ QSSQGLGNED GIDCKGMLED DGVFSSFLNS LINDDMFV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.13e-74MYB family protein