PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0073s0135.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | SBP | ||||||||
Protein Properties | Length: 187aa MW: 20723.4 Da PI: 9.0974 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 130.1 | 8.1e-41 | 67 | 143 | 1 | 77 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cq+++C adl+ ak+yhrrhkvCe+h+ka+vvl++g++qrfCqqCsrfhe+sefDe+krsCrrrLa+hnerrrk++ Kaladp0073s0135.1.p 67 CCQADKCGADLAVAKQYHRRHKVCEAHAKAQVVLLAGIRQRFCQQCSRFHEVSEFDESKRSCRRRLAGHNERRRKHS 143 6**************************************************************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MDCSRRGKHA MNKAVKSESS DASLTAVIAC EEDEDDDQKV RKLGSLQVLV EQGKSRASSC 60 KPGVARCCQA DKCGADLAVA KQYHRRHKVC EAHAKAQVVL LAGIRQRFCQ QCSRFHEVSE 120 FDESKRSCRR RLAGHNERRR KHSPAAAAVD PQGQESSSQK GIVVCGVIDD RGRFDYSLPE 180 KNFHIR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53160.1 | 4e-42 | SBP family protein |