PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0073s0030.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 448aa MW: 49609.4 Da PI: 4.9379

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0073s0030.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	106	4.6e-33	59	198	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.....vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk 79 lp+G++F+Ptd+e++ ++L +k+ + + + v ke +i++++P++Lp vk + + +fF+++ k+y+tg+rk+r+++ Kaladp0073s0030.1.p 59 LPRGVKFDPTDQEII-HHLLAKCGIGNlkahpfI---NefiptVNKEDGICYTHPQNLP-GVKLDGSVAHFFHRAIKAYNTGSRKRRKIQ 143 799**********.666666666663454332...133331233336******.666788999**************855 PP NAM 80 .....sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tg++k+v+ +g ++g+kk++v+y ++ k+ekt+Wvmh+y+l Kaladp0073s0030.1.p 144 gdssgDVRWHKTGRTKPVML-DGVQKGCKKIMVLYisPAKGGKAEKTNWVMHQYHL 198 55544778********.99********5534667778*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MSTGPTWLVD GHRIATKIKS AAGASDLGHM KWKSNPCRAC PNCQYIIDNS DVPQDWPGLP 60 RGVKFDPTDQ EIIHHLLAKC GIGNLKAHPF INEFIPTVNK EDGICYTHPQ NLPGVKLDGS 120 VAHFFHRAIK AYNTGSRKRR KIQGDSSGDV RWHKTGRTKP VMLDGVQKGC KKIMVLYISP 180 AKGGKAEKTN WVMHQYHLGT EEDEKDGECV ISKIFYQQQP GKASDGVEQE ISETSNTAVA 240 KVDPVTPRSA IPVPPRTEAR DSDLELVEES ALTQMEPLHQ GLDTDYTGDL DEQNESEAIK 300 IQDQPRAEGH SGEGDAVENN DNPAAEDPSW WEESPFLLNS QQLAEGLAIC DDLLQSQSPG 360 RQGFANPQES KGRPRLADYS RLGPENLKKD LEECQTLEFD PTKIELDALL ELHLSQDIRL 420 SQDFRLSQLE FCSQDSFCAF GGNKVID*

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MSTGPTWLVD GHRIATKIKS AAGASDLGHM KWKSNPCRAC PNCQYIIDNS DVPQDWPGLP  60
RGVKFDPTDQ EIIHHLLAKC GIGNLKAHPF INEFIPTVNK EDGICYTHPQ NLPGVKLDGS  120
VAHFFHRAIK AYNTGSRKRR KIQGDSSGDV RWHKTGRTKP VMLDGVQKGC KKIMVLYISP  180
AKGGKAEKTN WVMHQYHLGT EEDEKDGECV ISKIFYQQQP GKASDGVEQE ISETSNTAVA  240
KVDPVTPRSA IPVPPRTEAR DSDLELVEES ALTQMEPLHQ GLDTDYTGDL DEQNESEAIK  300
IQDQPRAEGH SGEGDAVENN DNPAAEDPSW WEESPFLLNS QQLAEGLAIC DDLLQSQSPG  360
RQGFANPQES KGRPRLADYS RLGPENLKKD LEECQTLEFD PTKIELDALL ELHLSQDIRL  420
SQDFRLSQLE FCSQDSFCAF GGNKVID*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-159	NAC family protein