PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0073s0027.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | C2H2 | ||||||||
Protein Properties | Length: 292aa MW: 33046.9 Da PI: 8.6689 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.5 | 2.4e-05 | 124 | 143 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r n++ H+ Kaladp0073s0027.1.p 124 FSCSVCSKTFNRYNNMQMHM 143 89*****************9 PP | |||||||
2 | zf-C2H2 | 17 | 1.6e-05 | 209 | 231 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++Cgk F k + ++H +++ Kaladp0073s0027.1.p 209 FACHKCGKAFAVKGDWRTHEKNC 231 78*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MQQLSSFTYK SPRSSNQSSY QHQEDTDFIQ LSLSPPGQQR LSKTKQQQPH SHPPSTQTLK 60 ASNTFNSSHT NGSVDRDLHS GSHMERVNNA SDAVGKGSSH SGFIEKPPYW IPSPAQILVG 120 PTQFSCSVCS KTFNRYNNMQ MHMWGHGSQY RKGPESLRGT KLTSTMLRVP CYCCIEDCRN 180 NINHLRPKPL KDFRTLQTHY KRKHGAKPFA CHKCGKAFAV KGDWRTHEKN CGKIWLCVCG 240 SDFKHKRSLK DHVRALGDCH GPQSLEFYDR AIHHEDAEDD EGEELDGHED H* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13290.1 | 1e-101 | C2H2 family protein |