PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0072s0069.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 255aa MW: 29152.8 Da PI: 7.9161 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.5 | 5.4e-17 | 8 | 55 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd+ll+++++++G g W+ + + g++R++k+c++rw++yl Kaladp0072s0069.1.p 8 RGAWTPEEDKLLKECIEKYGVGKWNEVVTRSGLNRCRKSCRLRWLDYL 55 89*******************************************997 PP | |||||||
2 | Myb_DNA-binding | 40.9 | 4.7e-13 | 61 | 106 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + ++E +l+ +++k+lG++ W++Ia +++ gRt++ +k++w++++ Kaladp0072s0069.1.p 61 RGGFGEDEVDLICKLHKLLGNR-WSLIAGRLP-GRTANGVKNYWNSHM 106 677899****************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MSGLGVRRGA WTPEEDKLLK ECIEKYGVGK WNEVVTRSGL NRCRKSCRLR WLDYLQPNIK 60 RGGFGEDEVD LICKLHKLLG NRWSLIAGRL PGRTANGVKN YWNSHMRKKQ HQKVMCHKAS 120 SHHQTTTPNK EGCVIVKPQP WRFSKTSLAS LQKKLSVQFQ HNFHCDRVKN DTKQTCSPYS 180 FELQEDALSI SSWWEDLLQK DDNFFVDQNA DDGSVGICWS DVDAGTTTAE CNEADGVVNL 240 DDQELYFNIQ LWDS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 3e-58 | MYB family protein |