PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0071s0403.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 373aa MW: 41890.7 Da PI: 6.834

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0071s0403.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.6	9e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++q G+g +W + ++++g++R++k+c++rw++yl Kaladp0071s0403.1.p 14 KGPWSPEEDAKLKSYIEQNGTGgNWIALPHKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37.4	5.9e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ Kaladp0071s0403.1.p 69 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKSYIE QNGTGGNWIA LPHKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 QRKDHHRHQA RRISGLKQES LMMTMNKEAV DSSMVHISNH NNTETPYWPE LPVLAPTSYS 180 NEDARSLNDH ASIRRLLVKL GGRFSSTDES MHHNGNMEQF PPINAMSSAD SNVIYPQEGA 240 ASYLTSTSMD PLTNHNYPFE HPQFMMEGSG MGLLQGLEQH QPNETRQLGL DSSSHGLVDG 300 LEFLYGDELY NNRNGEESMT YGDMLSRSGS YLVYHSQIMA HSTNSNNYNQ QGVAQQSSSF 360 DELQYSGGVV EE*

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKSYIE QNGTGGNWIA LPHKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
QRKDHHRHQA RRISGLKQES LMMTMNKEAV DSSMVHISNH NNTETPYWPE LPVLAPTSYS  180
NEDARSLNDH ASIRRLLVKL GGRFSSTDES MHHNGNMEQF PPINAMSSAD SNVIYPQEGA  240
ASYLTSTSMD PLTNHNYPFE HPQFMMEGSG MGLLQGLEQH QPNETRQLGL DSSSHGLVDG  300
LEFLYGDELY NNRNGEESMT YGDMLSRSGS YLVYHSQIMA HSTNSNNYNQ QGVAQQSSSF  360
DELQYSGGVV EE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65790.1	2e-81	MYB family protein