PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0071s0363.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 312aa    MW: 32663.8 Da    PI: 7.6364
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0071s0363.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.82.2e-066991123
                         EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                         ++C++Cgk+Fs++  L  H++ H
  Kaladp0071s0363.1.p 69 HVCKYCGKVFSTSQALGGHQNGH 91
                         79*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MNKGKKGDED VDVNNNIAAV TSLSLALVIA PQAAGGSSGA GGERMSSRHQ AEPENVVERS  60
NSGGGRKDHV CKYCGKVFST SQALGGHQNG HKKEREADRF RESLDKIMGR EPNASNRYHP  120
YLNFPPNNNS RLEGLNLGGG GFTSRQPLYQ LPHSALLASG LGQGAGVPMQ MRAPPPPVPR  180
FGGQGFAQRF GSWSEFVKRP NAASGEGSSS SRSGGGSSVV QRLSYLPGGI GFRPNAISSA  240
IVDPNVNPNC NKDPHLNPSS NANANPDAND NRNATGEADA NANANVPMVA ADPGDGNEEA  300
DERELDLTLR L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G27880.13e-10C2H2 family protein