PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0071s0229.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 524aa MW: 57181.7 Da PI: 8.7819

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0071s0229.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00015	47	67	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k F r nL+ H r H Kaladp0071s0229.3.p 47 CEICNKGFQRDQNLQLHRRGH 67 *******************88 PP
2	zf-C2H2	11	0.0013	122	144	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + ks+ k H + + Kaladp0071s0229.3.p 122 WKCDKCPKKYAVKSDWKAHSKIC 144 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MMSQATQPSA SSSALKRKRN LPGTPDPDSE VVALSPTSLM ATNRFLCEIC NKGFQRDQNL 60 QLHRRGHNLP WKLKQRSNKE VVKKKVYICP EKSCVHHDPS RALGDLTGIK KHFSRKHGEK 120 KWKCDKCPKK YAVKSDWKAH SKICGTKEHK CDCGTLFSRK DSFITHRAFC TAVVDQSGSR 180 FASSVAAGTN NPLSLRNDFL SENLGIPQGV DTNQFSGGGF YPELSTSFHS YGHVSNSTDG 240 SKSVRHIIPQ WLDQHPALNA SAHLLMGNLA GNLSHELLLQ NAGQVNLFGS SSSSQAPWLN 300 KCTDQSAFGG ANMSSLDQIL GNTSGGSSGM MQVKREDEIL SNADFVENMT TSLYNPNNLS 360 HQQQQAITSN QSAADQFLSS FYGRSNSNSL GLISSGASNG QVSFAGNNNN GFVDNSSFCI 420 ISRPPPPVIK DSDNTNASLN HHHQMLLHEA VAAGRAKPPE TNPNAIKQQQ AESSQTRDFL 480 GVGRNEIMRE EQFQLAMVSD QQFGSAAAGA ESDMSHYNQQ WKH*

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MMSQATQPSA SSSALKRKRN LPGTPDPDSE VVALSPTSLM ATNRFLCEIC NKGFQRDQNL  60
QLHRRGHNLP WKLKQRSNKE VVKKKVYICP EKSCVHHDPS RALGDLTGIK KHFSRKHGEK  120
KWKCDKCPKK YAVKSDWKAH SKICGTKEHK CDCGTLFSRK DSFITHRAFC TAVVDQSGSR  180
FASSVAAGTN NPLSLRNDFL SENLGIPQGV DTNQFSGGGF YPELSTSFHS YGHVSNSTDG  240
SKSVRHIIPQ WLDQHPALNA SAHLLMGNLA GNLSHELLLQ NAGQVNLFGS SSSSQAPWLN  300
KCTDQSAFGG ANMSSLDQIL GNTSGGSSGM MQVKREDEIL SNADFVENMT TSLYNPNNLS  360
HQQQQAITSN QSAADQFLSS FYGRSNSNSL GLISSGASNG QVSFAGNNNN GFVDNSSFCI  420
ISRPPPPVIK DSDNTNASLN HHHQMLLHEA VAAGRAKPPE TNPNAIKQQQ AESSQTRDFL  480
GVGRNEIMRE EQFQLAMVSD QQFGSAAAGA ESDMSHYNQQ WKH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	1e-97	C2H2 family protein