PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0071s0229.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 521aa MW: 56926.4 Da PI: 8.7819

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0071s0229.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00015	44	64	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k F r nL+ H r H Kaladp0071s0229.2.p 44 CEICNKGFQRDQNLQLHRRGH 64 *******************88 PP
2	zf-C2H2	11	0.0013	119	141	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + ks+ k H + + Kaladp0071s0229.2.p 119 WKCDKCPKKYAVKSDWKAHSKIC 141 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 521 aa Download sequence
MMSQATQPSA SSSALKRKRN LPDPDSEVVA LSPTSLMATN RFLCEICNKG FQRDQNLQLH 60 RRGHNLPWKL KQRSNKEVVK KKVYICPEKS CVHHDPSRAL GDLTGIKKHF SRKHGEKKWK 120 CDKCPKKYAV KSDWKAHSKI CGTKEHKCDC GTLFSRKDSF ITHRAFCTAV VDQSGSRFAS 180 SVAAGTNNPL SLRNDFLSEN LGIPQGVDTN QFSGGGFYPE LSTSFHSYGH VSNSTDGSKS 240 VRHIIPQWLD QHPALNASAH LLMGNLAGNL SHELLLQNAG QVNLFGSSSS SQAPWLNKCT 300 DQSAFGGANM SSLDQILGNT SGGSSGMMQV KREDEILSNA DFVENMTTSL YNPNNLSHQQ 360 QQAITSNQSA ADQFLSSFYG RSNSNSLGLI SSGASNGQVS FAGNNNNGFV DNSSFCIISR 420 PPPPVIKDSD NTNASLNHHH QMLLHEAVAA GRAKPPETNP NAIKQQQAES SQTRDFLGVG 480 RNEIMREEQF QLAMVSDQQF GSAAAGAESD MSHYNQQWKH *

Sequence ? help Back to Top

Protein Sequence Length: 521 aa Download sequence

MMSQATQPSA SSSALKRKRN LPDPDSEVVA LSPTSLMATN RFLCEICNKG FQRDQNLQLH  60
RRGHNLPWKL KQRSNKEVVK KKVYICPEKS CVHHDPSRAL GDLTGIKKHF SRKHGEKKWK  120
CDKCPKKYAV KSDWKAHSKI CGTKEHKCDC GTLFSRKDSF ITHRAFCTAV VDQSGSRFAS  180
SVAAGTNNPL SLRNDFLSEN LGIPQGVDTN QFSGGGFYPE LSTSFHSYGH VSNSTDGSKS  240
VRHIIPQWLD QHPALNASAH LLMGNLAGNL SHELLLQNAG QVNLFGSSSS SQAPWLNKCT  300
DQSAFGGANM SSLDQILGNT SGGSSGMMQV KREDEILSNA DFVENMTTSL YNPNNLSHQQ  360
QQAITSNQSA ADQFLSSFYG RSNSNSLGLI SSGASNGQVS FAGNNNNGFV DNSSFCIISR  420
PPPPVIKDSD NTNASLNHHH QMLLHEAVAA GRAKPPETNP NAIKQQQAES SQTRDFLGVG  480
RNEIMREEQF QLAMVSDQQF GSAAAGAESD MSHYNQQWKH *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	1e-93	C2H2 family protein