PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0071s0229.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 550aa MW: 59910.6 Da PI: 8.436

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0071s0229.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.9	0.00016	73	93	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k F r nL+ H r H Kaladp0071s0229.1.p 73 CEICNKGFQRDQNLQLHRRGH 93 *******************88 PP
2	zf-C2H2	10.9	0.0014	148	170	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + ks+ k H + + Kaladp0071s0229.1.p 148 WKCDKCPKKYAVKSDWKAHSKIC 170 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MMSQGLSPVP SSFLGFIEDQ IQNPDSSNTP ATQPSASSSA LKRKRNLPGT PDPDSEVVAL 60 SPTSLMATNR FLCEICNKGF QRDQNLQLHR RGHNLPWKLK QRSNKEVVKK KVYICPEKSC 120 VHHDPSRALG DLTGIKKHFS RKHGEKKWKC DKCPKKYAVK SDWKAHSKIC GTKEHKCDCG 180 TLFSRKDSFI THRAFCTAVV DQSGSRFASS VAAGTNNPLS LRNDFLSENL GIPQGVDTNQ 240 FSGGGFYPEL STSFHSYGHV SNSTDGSKSV RHIIPQWLDQ HPALNASAHL LMGNLAGNLS 300 HELLLQNAGQ VNLFGSSSSS QAPWLNKCTD QSAFGGANMS SLDQILGNTS GGSSGMMQVK 360 REDEILSNAD FVENMTTSLY NPNNLSHQQQ QAITSNQSAA DQFLSSFYGR SNSNSLGLIS 420 SGASNGQVSF AGNNNNGFVD NSSFCIISRP PPPVIKDSDN TNASLNHHHQ MLLHEAVAAG 480 RAKPPETNPN AIKQQQAESS QTRDFLGVGR NEIMREEQFQ LAMVSDQQFG SAAAGAESDM 540 SHYNQQWKH*

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MMSQGLSPVP SSFLGFIEDQ IQNPDSSNTP ATQPSASSSA LKRKRNLPGT PDPDSEVVAL  60
SPTSLMATNR FLCEICNKGF QRDQNLQLHR RGHNLPWKLK QRSNKEVVKK KVYICPEKSC  120
VHHDPSRALG DLTGIKKHFS RKHGEKKWKC DKCPKKYAVK SDWKAHSKIC GTKEHKCDCG  180
TLFSRKDSFI THRAFCTAVV DQSGSRFASS VAAGTNNPLS LRNDFLSENL GIPQGVDTNQ  240
FSGGGFYPEL STSFHSYGHV SNSTDGSKSV RHIIPQWLDQ HPALNASAHL LMGNLAGNLS  300
HELLLQNAGQ VNLFGSSSSS QAPWLNKCTD QSAFGGANMS SLDQILGNTS GGSSGMMQVK  360
REDEILSNAD FVENMTTSLY NPNNLSHQQQ QAITSNQSAA DQFLSSFYGR SNSNSLGLIS  420
SGASNGQVSF AGNNNNGFVD NSSFCIISRP PPPVIKDSDN TNASLNHHHQ MLLHEAVAAG  480
RAKPPETNPN AIKQQQAESS QTRDFLGVGR NEIMREEQFQ LAMVSDQQFG SAAAGAESDM  540
SHYNQQWKH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	2e-97	C2H2 family protein