PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0071s0135.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Whirly
Protein Properties Length: 277aa    MW: 31035 Da    PI: 9.4166
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0071s0135.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly204.11.7e-631012381138
               Whirly   1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkv 90 
                          s+yk+kaal+v++++p+f+ +dsg+ k++++G++ l++a+a + r+ydW++kq+f+ls+ ev+++++l++k+sceffhdp+++ s+eGkv
  Kaladp0071s0135.1.p 101 SIYKGKAALTVEPRAPEFSLMDSGAYKISKDGFVYLQFAPASGFRQYDWSRKQVFSLSVFEVGSIISLGPKDSCEFFHDPFKGRSDEGKV 190
                          7***************************************************************************************** PP

               Whirly  91 rkalkvePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsll 138
                          rk+lkvePlpdGsG+f+nlsv+n l++++es+++P+ kaef+vl s++
  Kaladp0071s0135.1.p 191 RKVLKVEPLPDGSGHFFNLSVQNRLLNVDESIYIPINKAEFTVLVSAM 238
                          ********************************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MANLRVFAPQ FAFRNPRTTS QLHISSYESI TSVNFAQPVR TRATCHSGRT KPYLECMQSE  60
YFEPQRFSSS RRSMERFRSD DDGGGGGSAP SPSTRVYVGY SIYKGKAALT VEPRAPEFSL  120
MDSGAYKISK DGFVYLQFAP ASGFRQYDWS RKQVFSLSVF EVGSIISLGP KDSCEFFHDP  180
FKGRSDEGKV RKVLKVEPLP DGSGHFFNLS VQNRLLNVDE SIYIPINKAE FTVLVSAMKF  240
ILPYLLGWNA FANSIKPEDS LRGNNANASV DFEWSR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14410.11e-107Whirly family protein