PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0071s0124.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 469aa MW: 53051.5 Da PI: 6.1242 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.4 | 3.9e-14 | 22 | 66 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd++l + ++ +G+++W+ +a+++ +t qc+ rw++yl Kaladp0071s0124.2.p 22 VWTQEEDDILREQIRIYGTDNWAIVASKFS-DKTTRQCRRRWYTYL 66 6*****************************.*************97 PP | |||||||
2 | Myb_DNA-binding | 47.9 | 3e-15 | 72 | 115 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g WT+eEd ll +a +++G++ W+ Ia+++ gRt++ +k+r+ + Kaladp0071s0124.2.p 72 KGGWTPEEDMLLCEAQRKFGNK-WTEIAKMVS-GRTDNAVKNRFST 115 688*******************.*********.**********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 469 aa Download sequence |
MKKRSDINTI EGVKLKERHI VVWTQEEDDI LREQIRIYGT DNWAIVASKF SDKTTRQCRR 60 RWYTYLNSDF KKGGWTPEED MLLCEAQRKF GNKWTEIAKM VSGRTDNAVK NRFSTLCKKR 120 AKREALAKED NIALSNVGKK RILLKSEVGV QENEAPYKKM RRTHIPVPAE SCNREKVVPG 180 EYEKSVQNQL RPPLAALVKN SVNVGNLLNR RHIPIPKESI HDGHNYYDED SSLAKDDTEG 240 AALMRQAESF TSLAVRASAQ NTEHSLEHAW KVLRELLSQT KDGDLLRCNI SDVNFQLEEF 300 KNLLQDFKNR EEGMRQPDLY EESSGSSDYS TGSTLLSHAT EGTPINQPMD TSELNQDMGS 360 EIQVTPGQKE NEESMTMFGS LSYQDGFQSS QEPNGEEVVS AESAVEFGSP LHVTPLFPDE 420 STEIPSPKFS ESERNFLIKA LGMEAPYHPG TNLSQPHPIC KRALLHSL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02820.2 | 1e-119 | MYB family protein |