PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0071s0124.18.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 470aa MW: 53122.5 Da PI: 6.1242

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0071s0124.18.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.4	3.9e-14	22	66	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd++l + ++ +G+++W+ +a+++ +t qc+ rw++yl Kaladp0071s0124.18.p 22 VWTQEEDDILREQIRIYGTDNWAIVASKFS-DKTTRQCRRRWYTYL 66 6***************************.***********97 PP
2	Myb_DNA-binding	47.9	3e-15	72	115	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g WT+eEd ll +a +++G++ W+ Ia+++ gRt++ +k+r+ + Kaladp0071s0124.18.p 72 KGGWTPEEDMLLCEAQRKFGNK-WTEIAKMVS-GRTDNAVKNRFST 115 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MKKRSDINTI EGVKLKERHI VVWTQEEDDI LREQIRIYGT DNWAIVASKF SDKTTRQCRR 60 RWYTYLNSDF KKGGWTPEED MLLCEAQRKF GNKWTEIAKM VSGRTDNAVK NRFSTLCKKR 120 AKREALAKED NIALSNVGKK RILLKSEVGV QENEAPYKKM RRTHIPVPAE SCNREKVVPG 180 EYEKSVQNQL RPPLAALVKN SVNVGNLLNR RHIPIPKESI HDGHNYYDED SSLAKDDTEG 240 AALMRQAESF TSLAVRASAQ NTEHSLEHAW KVLRELLSQT KDGDLLRCNI SDVNFQLEEF 300 KNLLQDFKNR EEGMRQPDLY EESSGSSDYS TGSTLLSHAT EGTPINQPMD TSELNQDMGS 360 EIQVTPGQKE NEESMTMFGS LSYQADGFQS SQEPNGEEVV SAESAVEFGS PLHVTPLFPD 420 ESTEIPSPKF SESERNFLIK ALGMEAPYHP GTNLSQPHPI CKRALLHSL*

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MKKRSDINTI EGVKLKERHI VVWTQEEDDI LREQIRIYGT DNWAIVASKF SDKTTRQCRR  60
RWYTYLNSDF KKGGWTPEED MLLCEAQRKF GNKWTEIAKM VSGRTDNAVK NRFSTLCKKR  120
AKREALAKED NIALSNVGKK RILLKSEVGV QENEAPYKKM RRTHIPVPAE SCNREKVVPG  180
EYEKSVQNQL RPPLAALVKN SVNVGNLLNR RHIPIPKESI HDGHNYYDED SSLAKDDTEG  240
AALMRQAESF TSLAVRASAQ NTEHSLEHAW KVLRELLSQT KDGDLLRCNI SDVNFQLEEF  300
KNLLQDFKNR EEGMRQPDLY EESSGSSDYS TGSTLLSHAT EGTPINQPMD TSELNQDMGS  360
EIQVTPGQKE NEESMTMFGS LSYQADGFQS SQEPNGEEVV SAESAVEFGS PLHVTPLFPD  420
ESTEIPSPKF SESERNFLIK ALGMEAPYHP GTNLSQPHPI CKRALLHSL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.2	1e-119	MYB family protein