PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0071s0124.11.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 469aa MW: 52966.4 Da PI: 5.9812 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.4 | 3.9e-14 | 22 | 66 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd++l + ++ +G+++W+ +a+++ +t qc+ rw++yl Kaladp0071s0124.11.p 22 VWTQEEDDILREQIRIYGTDNWAIVASKFS-DKTTRQCRRRWYTYL 66 6*****************************.*************97 PP | |||||||
2 | Myb_DNA-binding | 47.9 | 3e-15 | 72 | 115 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g WT+eEd ll +a +++G++ W+ Ia+++ gRt++ +k+r+ + Kaladp0071s0124.11.p 72 KGGWTPEEDMLLCEAQRKFGNK-WTEIAKMVS-GRTDNAVKNRFST 115 688*******************.*********.**********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 469 aa Download sequence |
MKKRSDINTI EGVKLKERHI VVWTQEEDDI LREQIRIYGT DNWAIVASKF SDKTTRQCRR 60 RWYTYLNSDF KKGGWTPEED MLLCEAQRKF GNKWTEIAKM VSGRTDNAVK NRFSTLCKKR 120 AKREALAKED NIALSNVGKK RILLKSEVGV QENEAPYKKM RTHIPVPAES CNREKVVPGE 180 YEKSVQNQLR PPLAALVKNS VNVGNLLNRR HIPIPKESIH DGHNYYDEDS SLAKDDTEGA 240 ALMRQAESFT SLAVRASAQN TEHSLEHAWK VLRELLSQTK DGDLLRCNIS DVNFQLEEFK 300 NLLQDFKNRE EGMRQPDLYE ESSGSSDYST GSTLLSHATE GTPINQPMDT SELNQDMGSE 360 IQVTPGQKEN EESMTMFGSL SYQADGFQSS QEPNGEEVVS AESAVEFGSP LHVTPLFPDE 420 STEIPSPKFS ESERNFLIKA LGMEAPYHPG TNLSQPHPIC KRALLHSL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02820.2 | 1e-116 | MYB family protein |