PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0071s0124.10.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 469aa MW: 52966.4 Da PI: 5.9812

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0071s0124.10.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.4	3.9e-14	22	66	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd++l + ++ +G+++W+ +a+++ +t qc+ rw++yl Kaladp0071s0124.10.p 22 VWTQEEDDILREQIRIYGTDNWAIVASKFS-DKTTRQCRRRWYTYL 66 6***************************.***********97 PP
2	Myb_DNA-binding	47.9	3e-15	72	115	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g WT+eEd ll +a +++G++ W+ Ia+++ gRt++ +k+r+ + Kaladp0071s0124.10.p 72 KGGWTPEEDMLLCEAQRKFGNK-WTEIAKMVS-GRTDNAVKNRFST 115 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MKKRSDINTI EGVKLKERHI VVWTQEEDDI LREQIRIYGT DNWAIVASKF SDKTTRQCRR 60 RWYTYLNSDF KKGGWTPEED MLLCEAQRKF GNKWTEIAKM VSGRTDNAVK NRFSTLCKKR 120 AKREALAKED NIALSNVGKK RILLKSEVGV QENEAPYKKM RTHIPVPAES CNREKVVPGE 180 YEKSVQNQLR PPLAALVKNS VNVGNLLNRR HIPIPKESIH DGHNYYDEDS SLAKDDTEGA 240 ALMRQAESFT SLAVRASAQN TEHSLEHAWK VLRELLSQTK DGDLLRCNIS DVNFQLEEFK 300 NLLQDFKNRE EGMRQPDLYE ESSGSSDYST GSTLLSHATE GTPINQPMDT SELNQDMGSE 360 IQVTPGQKEN EESMTMFGSL SYQADGFQSS QEPNGEEVVS AESAVEFGSP LHVTPLFPDE 420 STEIPSPKFS ESERNFLIKA LGMEAPYHPG TNLSQPHPIC KRALLHSL*

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MKKRSDINTI EGVKLKERHI VVWTQEEDDI LREQIRIYGT DNWAIVASKF SDKTTRQCRR  60
RWYTYLNSDF KKGGWTPEED MLLCEAQRKF GNKWTEIAKM VSGRTDNAVK NRFSTLCKKR  120
AKREALAKED NIALSNVGKK RILLKSEVGV QENEAPYKKM RTHIPVPAES CNREKVVPGE  180
YEKSVQNQLR PPLAALVKNS VNVGNLLNRR HIPIPKESIH DGHNYYDEDS SLAKDDTEGA  240
ALMRQAESFT SLAVRASAQN TEHSLEHAWK VLRELLSQTK DGDLLRCNIS DVNFQLEEFK  300
NLLQDFKNRE EGMRQPDLYE ESSGSSDYST GSTLLSHATE GTPINQPMDT SELNQDMGSE  360
IQVTPGQKEN EESMTMFGSL SYQADGFQSS QEPNGEEVVS AESAVEFGSP LHVTPLFPDE  420
STEIPSPKFS ESERNFLIKA LGMEAPYHPG TNLSQPHPIC KRALLHSL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.2	1e-116	MYB family protein