PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0071s0123.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 324aa    MW: 36255.9 Da    PI: 6.5091
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0071s0123.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.54.7e-18100153356
                          --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          k+++++ eq+++Le+ Fe  +++  e++ +LA+ lgL+ rq+ +WFqNrRa++k
  Kaladp0071s0123.1.p 100 KKRRLNVEQVKTLEKSFELGNKLEPERKVQLARALGLQPRQIAIWFQNRRARWK 153
                          566899***********************************************9 PP
2HD-ZIP_I/II130.56.7e-4299189191
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                          +kkrrl+ eqvk+LE+sFe  +kLeperKv+lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+aLkr++da+k++ne+L++++++L+++
  Kaladp0071s0123.1.p  99 QKKRRLNVEQVKTLEKSFELGNKLEPERKVQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDALKRQFDAVKAHNEALQTQNQKLQSQ 188
                          69**************************************************************************************99 PP

          HD-ZIP_I/II  91 l 91 
                          +
  Kaladp0071s0123.1.p 189 I 189
                          8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MGCNGMAFFP ANFMLQTSQD QEDEDDNHHQ HNQHQRHQQP PIFPSPQDFN GVAAFLGGKR  60
SMPLMEQHQS NNGCEDNTKN NTNGDQDELS DDGSLAGDQK KRRLNVEQVK TLEKSFELGN  120
KLEPERKVQL ARALGLQPRQ IAIWFQNRRA RWKTKQLEKD YDALKRQFDA VKAHNEALQT  180
QNQKLQSQIL ALTSGREGGG GAAGVATESF NLNKETIDQG SCSNRSENSS DHQINMVKLG  240
PASETSPSQI PTSMPLFPTS TSTTTTNSMR PASSSNLSAT QLLFHHHNPQ HGVKEENFSN  300
MMFCGIEDHS GFWPWLDQHQ NFN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1148156RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.11e-91HD-ZIP family protein