PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0071s0038.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 310aa    MW: 33847.2 Da    PI: 5.6143
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0071s0038.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.51.8e-163988255
                         HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                         r +h+  E+rRR++iN++f++Lr+l+P++    ++K + a+ L +++eY+++Lq
  Kaladp0071s0038.1.p 39 RSKHSVTEQRRRSKINERFQRLRDLIPNS----DQKRDTASFLLEVIEYVQYLQ 88
                         899*************************9....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MRSGVKNSNE EEDYGEEDQG GNQSNRDGKG SASKANATRS KHSVTEQRRR SKINERFQRL  60
RDLIPNSDQK RDTASFLLEV IEYVQYLQGE VQKYEGPYQP WSAEPAKLMP WRNSHWRTQS  120
IAPQPLGNGV GAGYAPKFND TSQSMLLGHP HEFSEPDALA DPTGKAMDQH PDLPGQAMSM  180
AMQVLSHPPQ NDGLLSHQMQ RPLSDAQSGD PSLAAGTFSQ PDGLIIESGT ISLSTAYSQG  240
LLNTLTDTLQ RAGVDLSQAN ISVQIDLGKR ANRGPVALED YGNLPSTHQP PSSSGEDLEQ  300
AQKRLKTQN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.19e-77bHLH family protein