PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0070s0173.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 420aa    MW: 46357.1 Da    PI: 8.5372
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0070s0173.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.74.8e-065476123
                         EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                         y+C++C++ F r  nL+ H r+H
  Kaladp0070s0173.2.p 54 YVCEICNQGFQRDQNLQMHRRRH 76
                         9*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    
MLDPQASNNN NTAASTSSFQ NGLSSSKRKR RPAGTPDAEV VALSPKTLLE SDRYVCEICN  60
QGFQRDQNLQ MHRRRHKVPW KLVRREDSNK NGSGSNQEAK KRVYVCPEPS CLHHDASHAL  120
GDLVGIKKHF RRKHSNYKQW VCDKCCKGYA VQSDYKAHLK TCGTRGHSCD CGRVFSRVES  180
FIEHQDACTI KRVDPPQHQL QLPAAAFQPA CSSSTSPSGC GETAGLAMSH FQRVMQQAPK  240
AIQQQEPSRS HYLKQHNLLE LQLLPSSSNT MTSPDNDKNE TTLLRLSVGT FGGGGGQPRC  300
EEEATILRVA VAEKEYAEEV RRRSKRELEL AELEFENAKR IRQQALGELE RAKALRDEAV  360
KKISSTIMEI TCQACQQQFQ TSNVVAAPPL LPLAEESSLA VSFMSSAASE GDGGGGHQI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12732KRKRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68130.11e-114C2H2 family protein