PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0070s0173.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 422aa MW: 46569.3 Da PI: 8.4446

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0070s0173.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.7	4.9e-06	56	78	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H Kaladp0070s0173.1.p 56 YVCEICNQGFQRDQNLQMHRRRH 78 9*********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MLDPQASNNN NTAASTSSFQ NGLSSSKRKR RPAGTPDPDA EVVALSPKTL LESDRYVCEI 60 CNQGFQRDQN LQMHRRRHKV PWKLVRREDS NKNGSGSNQE AKKRVYVCPE PSCLHHDASH 120 ALGDLVGIKK HFRRKHSNYK QWVCDKCCKG YAVQSDYKAH LKTCGTRGHS CDCGRVFSRV 180 ESFIEHQDAC TIKRVDPPQH QLQLPAAAFQ PACSSSTSPS GCGETAGLAM SHFQRVMQQA 240 PKAIQQQEPS RSHYLKQHNL LELQLLPSSS NTMTSPDNDK NETTLLRLSV GTFGGGGGQP 300 RCEEEATILR VAVAEKEYAE EVRRRSKREL ELAELEFENA KRIRQQALGE LERAKALRDE 360 AVKKISSTIM EITCQACQQQ FQTSNVVAAP PLLPLAEESS LAVSFMSSAA SEGDGGGGHQ 420 I*

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MLDPQASNNN NTAASTSSFQ NGLSSSKRKR RPAGTPDPDA EVVALSPKTL LESDRYVCEI  60
CNQGFQRDQN LQMHRRRHKV PWKLVRREDS NKNGSGSNQE AKKRVYVCPE PSCLHHDASH  120
ALGDLVGIKK HFRRKHSNYK QWVCDKCCKG YAVQSDYKAH LKTCGTRGHS CDCGRVFSRV  180
ESFIEHQDAC TIKRVDPPQH QLQLPAAAFQ PACSSSTSPS GCGETAGLAM SHFQRVMQQA  240
PKAIQQQEPS RSHYLKQHNL LELQLLPSSS NTMTSPDNDK NETTLLRLSV GTFGGGGGQP  300
RCEEEATILR VAVAEKEYAE EVRRRSKREL ELAELEFENA KRIRQQALGE LERAKALRDE  360
AVKKISSTIM EITCQACQQQ FQTSNVVAAP PLLPLAEESS LAVSFMSSAA SEGDGGGGHQ  420
I*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	27	32	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68130.1	1e-117	C2H2 family protein