PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0070s0105.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 669aa    MW: 74743 Da    PI: 5.2287
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0070s0105.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS366.24.5e-1122926621373
                 GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90 
                          l+e+L +cA+av+s d + a++lL ++++++sp+gd++qRla+yf++ L+arl++s+++l++ ++ ++ +    ++ l+a+kl++  +P+
  Kaladp0070s0105.1.p 292 LREVLSQCAQAVASYDVRTATELLGKIRQQSSPYGDANQRLAHYFANSLEARLVGSSTHLFSLVRLRAPA----ADILKAYKLYVTSCPF 377
                          6789*********************************************************999999996....9*************** PP

                 GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfef 178
                           k+s++ aN+ + + + +++ +HiiDf+i +G+QWp+L+q L++Rp+gpp+lRiTg++ p++g   +e++eetg+rLak++++++vpfe+
  Kaladp0070s0105.1.p 378 KKISNVYANRLVDKLAVKATSLHIIDFGILYGFQWPCLIQRLSQRPGGPPRLRITGIDLPQPGfrPSERVEETGDRLAKYCKKFNVPFEY 467
                          **************************************************************9*************************** PP

                 GRAS 179 nvlvakrledleleeLrvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysal 267
                          ++ +a+++e+++le+L++   +++++Vn+ ++l +l+de+vs++++rd+vLkl+++++P++++ +  +  ++++ Fl+rf e+l ++sal
  Kaladp0070s0105.1.p 468 TP-IAQKWESIKLEDLNLGDrHDMVVVNCLYRLRNLPDETVSVTNPRDTVLKLIRKINPDIFIQAAVNGTYDAPFFLTRFRETLFHFSAL 556
                          **.7*************9877********************************************************************* PP

                 GRAS 268 fdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgs 357
                          +d +ea++p+e++er  +E+e+lgr+++n++aceg++r+ r et+++W++r+++aGF+++pl+++ +k +++ +r+ + + + v+e++++
  Kaladp0070s0105.1.p 557 YDIFEATVPSENQERLLYEKEVLGRDAMNIIACEGSQRIDRPETYRRWQSRIRRAGFSQLPLDQDLMKLVRSKVRREYHKDFVVDEDKQW 646
                          ******************************************************************************888********* PP

                 GRAS 358 lvlgWkdrpLvsvSaW 373
                          l++gWk+r L+++++W
  Kaladp0070s0105.1.p 647 LLQGWKGRILYALTVW 662
                          **************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 669 aa     Download sequence    
MEAAALMDPP IDFGFKTAAG LPCSKQILVN GYKLGGNMTP GDSGFSVDVG EYLVDAESPP  60
YWNPGAGSGS GSSSPDGDEA EHDSNATLKF INDILMEEDW DGKKCMFQDC MGALQAAEKS  120
FSDALYGHDQ PGHAASGFDP GLAAGSTVSE PFEHSGSFSV VGIESSVSSS GTYSQAEVSF  180
SEIFEQEAWR LDGINTSTAE MANRRGMGGR QRDRDGDDDC GEEGRRSKYS ATSPEESSPA  240
VEDEEVDDRF LLCDKDGECN ALERLIPQAS EKKVNRRNPS KKGEKKQQVV DLREVLSQCA  300
QAVASYDVRT ATELLGKIRQ QSSPYGDANQ RLAHYFANSL EARLVGSSTH LFSLVRLRAP  360
AADILKAYKL YVTSCPFKKI SNVYANRLVD KLAVKATSLH IIDFGILYGF QWPCLIQRLS  420
QRPGGPPRLR ITGIDLPQPG FRPSERVEET GDRLAKYCKK FNVPFEYTPI AQKWESIKLE  480
DLNLGDRHDM VVVNCLYRLR NLPDETVSVT NPRDTVLKLI RKINPDIFIQ AAVNGTYDAP  540
FFLTRFRETL FHFSALYDIF EATVPSENQE RLLYEKEVLG RDAMNIIACE GSQRIDRPET  600
YRRWQSRIRR AGFSQLPLDQ DLMKLVRSKV RREYHKDFVV DEDKQWLLQG WKGRILYALT  660
VWIPTSQD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-165GRAS family protein