PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0070s0019.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | WOX | ||||||||
Protein Properties | Length: 280aa MW: 31751.5 Da PI: 6.513 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.7 | 1.3e-20 | 97 | 157 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+++t+ ql++Le+ F k n +ps++++++++++l +++e++V++WFqNrRa+ k+ Kaladp0070s0019.1.p 97 RQRWAPTPVQLQILENIFDKgNGTPSKQKIKDITSELskhgQVSETNVYNWFQNRRARAKR 157 89*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 99.5 | 2.4e-32 | 96 | 159 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RW+Ptp Q++iLe+++++G tP+k++i++it+eL+++G+++++NV++WFQNr+aR ++kq Kaladp0070s0019.1.p 96 ARQRWAPTPVQLQILENIFDKGNGTPSKQKIKDITSELSKHGQVSETNVYNWFQNRRARAKRKQ 159 689***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence |
MMEWEKHHHH RRGVDAPVTE ADARLMMQEQ RQQQLVVMTD DQIEILRKQI AVYTILCDKL 60 VEMHRSLSSQ RDLSGVGIGN SYCDPLMISS SHKISARQRW APTPVQLQIL ENIFDKGNGT 120 PSKQKIKDIT SELSKHGQVS ETNVYNWFQN RRARAKRKQT VPATSNSETD GNQELDSSKE 180 KETKGEIFQS RPIPCSLNDD SRCRSSGMSS DLHSFDPLSS KAEAMFSSED ELKPPTTLGD 240 MSFYDSILSN RRIDQLSGRL ETEGGYHPYH QTDEYSMLG* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 151 | 159 | RRARAKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 5e-63 | WOX family protein |