PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0069s0062.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

FAR1

Protein Properties

Length: 884aa MW: 101762 Da PI: 8.4918

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0069s0062.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71.5	1.9e-22	177	262	2	87
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 fYn+Y+ ++GF +r++ + ks++n+e+++ +fvC+k+g+r+ ++k+ k +++ +tr+gC ak++++++ + +w v+k++ HnH Kaladp0069s0062.1.p 177 FYNDYSLNLGFGIRIHGHIKSRTNQEVIRWQFVCNKQGHRNLKDKRqLGKDVKPHRQTRVGCMAKMEITLR-NCEWIVDKFDDIHNH 262 **************************************9988875678899**************.9************ PP

Sequence ? help Back to Top
Protein Sequence Length: 884 aa Download sequence
MNAPRRSGTG GGSASEGDEV GVLEPDGRRK LITDGRHHIY DLFDWFYIVH GTEIVISKTK 60 HTFISPAACD RERETRAPFD SSLPCLRCCS ETKVTASSFE SIFLGFLTQW DEDDIIIDHI 120 EKGVDQLAPN DTSNKYEKGG DEANCENSDV NILSHIEPMN SSIIGKVFAS KDDAYTFYND 180 YSLNLGFGIR IHGHIKSRTN QEVIRWQFVC NKQGHRNLKD KRQLGKDVKP HRQTRVGCMA 240 KMEITLRNCE WIVDKFDDIH NHVPTTPSKV MKHRSHNKFH QTPIVKNLVY ELNKKGMKPS 300 TITRVVNAIS CSEEVKITSK QCPDMLRAER KNHVGRECHG IVRHFHEKSQ SDGSHYFAMD 360 LASDGSLKSV FWVDGRSRSA YSQFGDVLVF DVTYRTNHFR LPFAPFVGVN HHRQSILFDA 420 ALLEDETEVT FIWLFEQFLN CMFHKQPLTI ITDQDGAMRN AIRKIFCNTR HRLCAWHINK 480 HVIEHLHPYN IRYANFGESY TKWQKSKTIE EFELGWEMMK SRYNITKGSW LDDMYTQRYY 540 WVKVYLKDCF TAGMTTSGRS ESMNSYFDGY VNSNTMLNDF VKQYDKAVES RRNKEADEDF 600 RTLESHAMPL TNYPIEKQAG MLYTRNLFEI FKSEWRKNFD CIHKTNNKGD NFVEYLVGRH 660 SLDVNHWRIV NYLSSGDISI KCSCCKFEME GILCKHILYI CEKKNLEVIP ENYFLPRWTI 720 NARYKGNMSK TLVGSSELIG APPSPLGMWS VQRKFTIALE ACRTSPTDMK LLESLLDNYI 780 DKVGSKRPNE RVTNPEEDGS EKDRPSLVFV NDQCRMTVRD PATLAKNKGR PPLMKRMQSG 840 LELAAKAKKQ KTCRTCNEKG HNSSGCSQRK AKAVEALSTS NDF*

Sequence ? help Back to Top

Protein Sequence Length: 884 aa Download sequence

MNAPRRSGTG GGSASEGDEV GVLEPDGRRK LITDGRHHIY DLFDWFYIVH GTEIVISKTK  60
HTFISPAACD RERETRAPFD SSLPCLRCCS ETKVTASSFE SIFLGFLTQW DEDDIIIDHI  120
EKGVDQLAPN DTSNKYEKGG DEANCENSDV NILSHIEPMN SSIIGKVFAS KDDAYTFYND  180
YSLNLGFGIR IHGHIKSRTN QEVIRWQFVC NKQGHRNLKD KRQLGKDVKP HRQTRVGCMA  240
KMEITLRNCE WIVDKFDDIH NHVPTTPSKV MKHRSHNKFH QTPIVKNLVY ELNKKGMKPS  300
TITRVVNAIS CSEEVKITSK QCPDMLRAER KNHVGRECHG IVRHFHEKSQ SDGSHYFAMD  360
LASDGSLKSV FWVDGRSRSA YSQFGDVLVF DVTYRTNHFR LPFAPFVGVN HHRQSILFDA  420
ALLEDETEVT FIWLFEQFLN CMFHKQPLTI ITDQDGAMRN AIRKIFCNTR HRLCAWHINK  480
HVIEHLHPYN IRYANFGESY TKWQKSKTIE EFELGWEMMK SRYNITKGSW LDDMYTQRYY  540
WVKVYLKDCF TAGMTTSGRS ESMNSYFDGY VNSNTMLNDF VKQYDKAVES RRNKEADEDF  600
RTLESHAMPL TNYPIEKQAG MLYTRNLFEI FKSEWRKNFD CIHKTNNKGD NFVEYLVGRH  660
SLDVNHWRIV NYLSSGDISI KCSCCKFEME GILCKHILYI CEKKNLEVIP ENYFLPRWTI  720
NARYKGNMSK TLVGSSELIG APPSPLGMWS VQRKFTIALE ACRTSPTDMK LLESLLDNYI  780
DKVGSKRPNE RVTNPEEDGS EKDRPSLVFV NDQCRMTVRD PATLAKNKGR PPLMKRMQSG  840
LELAAKAKKQ KTCRTCNEKG HNSSGCSQRK AKAVEALSTS NDF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-116	FAR1 family protein