PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0067s0188.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | C2H2 | ||||||||
Protein Properties | Length: 168aa MW: 17408.2 Da PI: 4.4131 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.9 | 3.8e-05 | 86 | 107 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C +Cgk F ++ + H+r+H Kaladp0067s0188.1.p 86 PCLICGKAFHSQKAFFGHLRVH 107 7*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MAGKGDKAAG KKVAEGEEDS GAKDDNPDES VALPAKKRNR PDVAGGSSVA AAASESRVPA 60 AVVIQEPNLP AAAAVPAARG ERLPWPCLIC GKAFHSQKAF FGHLRVHPEK TYKGAFPPPT 120 FDPEGSPEPE AEQVEAAVPP VPNEEEASGV NTGIDLNVPP REEDDEE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35700.1 | 4e-10 | C2H2 family protein |