PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0067s0082.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Trihelix
Protein Properties Length: 321aa    MW: 35674.7 Da    PI: 4.7603
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0067s0082.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix106.91.4e-3352136186
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                          rW+k evlaLi++r+++e+r++++  k+plWee+s+ m++ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+ +tcpyf +l+
  Kaladp0067s0082.1.p  52 RWPKVEVLALIKLRSNLENRYQEAGPKGPLWEEISAGMQRMGYNRSSKRCKEKWENINKYFKKVKESNKKR-PEDAKTCPYFYELD 136
                          8*********************************************************************8.99999******998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MPIITLTLAV WIILEFYTIS IWNLIAIVIY HLQGDPASGG GGWSSSEAAS SRWPKVEVLA  60
LIKLRSNLEN RYQEAGPKGP LWEEISAGMQ RMGYNRSSKR CKEKWENINK YFKKVKESNK  120
KRPEDAKTCP YFYELDAIYQ RKILGGANTG SSSSSMVPFQ QQQPQQSLAL EGSTTTAKHQ  180
DTSVSNPGTV QTSATHAESI NKTDGTDLLV QPHNGGLPDD IFGDRGGHAR AGGGSTKPED  240
IMMELMKQQL VQQLLNLEDY EQQKMDELGD TTENVEEDQG EDEDESKEDR MAYEIDFQRP  300
PTNNKNGGNN GAPSFITMFQ *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.16e-50Trihelix family protein