PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0067s0040.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

HB-other

Protein Properties

Length: 1349aa MW: 151145 Da PI: 5.5694

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0067s0040.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.1	1.5e-18	23	78	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR+ t+ qle+Le+++++++yps++ r eL++kl+Lt+rq ++WF+ rR k+kk Kaladp0067s0040.2.p 23 PKRQMKTPFQLETLERAYAEDMYPSEAVRLELSEKLKLTDRQLQMWFCHRRLKDKK 78 69****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1349 aa Download sequence
MESGSEGENN EFGAERHGGG SKPKRQMKTP FQLETLERAY AEDMYPSEAV RLELSEKLKL 60 TDRQLQMWFC HRRLKDKKGA PPSTPAKKAT KKPVAEPPPA SPEELMDVGD QFSEQGSGSG 120 PDSDSDMESS PASYRETRNL SSLQYVNSPW GHESPQTIFE RRIVAAIEQQ LGESLREDGP 180 ILGIEFESPP PDAFTSPPEA RSGHRRYGSP LDREGYQHSG SRSKKSLAAY DGAEATQFYD 240 YTFESRSSSI PNFTSVQGHS KMPKQGRKVA PAVMDYEFTP RSDRFLETDA DNLFDGQTSY 300 GAESHHAGSG GKNLNVDVLR KDKKRKAEET KTLREADEKR IRKELEKQEI LRQKREEQLR 360 KEMEKVDRER KKEEERLMRE KQREEERILR EEKRERERRE KFLQRESLKA ERLRQKEELR 420 KEREALRLKA QLEKATARRI IRESMGYIED ERLELMELAV SSKGLESIAA LDYDSLQGLE 480 SFRDSLMEYP PKSVKLKKPF GIQPWLDSDE NIGNLLMVWR FFTTFADVLE LWPFTLDEFV 540 QAFHDYDSRL LGEMHVSLLK LMVKDIEDAA RAPQMASGTS QAAAVNPEGG HPHIIEGAYA 600 WGFDVRNWKQ HLNASTWPEI LRQLALSAGF GPLLKKKKTA KVESLDDIKE AKGSEDVVSI 660 LRNGSAAQNA IVKMQHRGLA LPRKPRHRLT PGTVKFAAFH ILSLEGSDGL TITELAERIQ 720 KYGLRDLSSS KKPEASIGVA LTRDTTLFER VAPSTYCVRP AYRKDPADAE SVLAAAKEKL 780 QALGNANLPG EDVDGVERDE DSECDGAADK ADELGTLSLV NEIGMAFDDE PGCLGNGNDN 840 SSDDGVINIS NEPDKESPFI SNNRTDMNGH GLSTDMDVAG MDMHRRNPDE ESLEVDESRS 900 GESWVQGLAE GDYSALSIEE RLNALVALIG LANEGNTLRA VLEGRLEAAN ALKKQMWAEA 960 ELDKKRAKDG ILTANPKPDA DVKPGNGGYQ SPMLVDEITE TGNNAGSLAN GNIPAIQDAF 1020 SNAEFASEQH KYSVEKSRIQ LKSLISHRAE ELYTYRHLPL GQDRRHNRYW QFAASASKHD 1080 PGTGRIFVES QDGHWRLIDT AESFDALLSS LDTRGVRESN LQHMLKRIES SFKGNLETNS 1140 SQAVKCGSRD TNSSPDCPSD ADSPRSMICA SAGSPECSSS FRIELGRTSV ERMSAFRKYL 1200 EFEKWAWREC FELETLCNLK YGERRCDPLL GHCDLCRDMY LYEDPHSHSC LQKPKNSDDD 1260 MLECDEHENG LVQYSHLPLG VRLLKGLLSL VEVRKSFHPV GRSSIFLGRR APEGVGHEAL 1320 CVFLDQGSLQ GLGFLGSCRQ ARLSIAKL*

Sequence ? help Back to Top

Protein Sequence Length: 1349 aa Download sequence

MESGSEGENN EFGAERHGGG SKPKRQMKTP FQLETLERAY AEDMYPSEAV RLELSEKLKL  60
TDRQLQMWFC HRRLKDKKGA PPSTPAKKAT KKPVAEPPPA SPEELMDVGD QFSEQGSGSG  120
PDSDSDMESS PASYRETRNL SSLQYVNSPW GHESPQTIFE RRIVAAIEQQ LGESLREDGP  180
ILGIEFESPP PDAFTSPPEA RSGHRRYGSP LDREGYQHSG SRSKKSLAAY DGAEATQFYD  240
YTFESRSSSI PNFTSVQGHS KMPKQGRKVA PAVMDYEFTP RSDRFLETDA DNLFDGQTSY  300
GAESHHAGSG GKNLNVDVLR KDKKRKAEET KTLREADEKR IRKELEKQEI LRQKREEQLR  360
KEMEKVDRER KKEEERLMRE KQREEERILR EEKRERERRE KFLQRESLKA ERLRQKEELR  420
KEREALRLKA QLEKATARRI IRESMGYIED ERLELMELAV SSKGLESIAA LDYDSLQGLE  480
SFRDSLMEYP PKSVKLKKPF GIQPWLDSDE NIGNLLMVWR FFTTFADVLE LWPFTLDEFV  540
QAFHDYDSRL LGEMHVSLLK LMVKDIEDAA RAPQMASGTS QAAAVNPEGG HPHIIEGAYA  600
WGFDVRNWKQ HLNASTWPEI LRQLALSAGF GPLLKKKKTA KVESLDDIKE AKGSEDVVSI  660
LRNGSAAQNA IVKMQHRGLA LPRKPRHRLT PGTVKFAAFH ILSLEGSDGL TITELAERIQ  720
KYGLRDLSSS KKPEASIGVA LTRDTTLFER VAPSTYCVRP AYRKDPADAE SVLAAAKEKL  780
QALGNANLPG EDVDGVERDE DSECDGAADK ADELGTLSLV NEIGMAFDDE PGCLGNGNDN  840
SSDDGVINIS NEPDKESPFI SNNRTDMNGH GLSTDMDVAG MDMHRRNPDE ESLEVDESRS  900
GESWVQGLAE GDYSALSIEE RLNALVALIG LANEGNTLRA VLEGRLEAAN ALKKQMWAEA  960
ELDKKRAKDG ILTANPKPDA DVKPGNGGYQ SPMLVDEITE TGNNAGSLAN GNIPAIQDAF  1020
SNAEFASEQH KYSVEKSRIQ LKSLISHRAE ELYTYRHLPL GQDRRHNRYW QFAASASKHD  1080
PGTGRIFVES QDGHWRLIDT AESFDALLSS LDTRGVRESN LQHMLKRIES SFKGNLETNS  1140
SQAVKCGSRD TNSSPDCPSD ADSPRSMICA SAGSPECSSS FRIELGRTSV ERMSAFRKYL  1200
EFEKWAWREC FELETLCNLK YGERRCDPLL GHCDLCRDMY LYEDPHSHSC LQKPKNSDDD  1260
MLECDEHENG LVQYSHLPLG VRLLKGLLSL VEVRKSFHPV GRSSIFLGRR APEGVGHEAL  1320
CVFLDQGSLQ GLGFLGSCRQ ARLSIAKL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	323	347	KKRKAEETKTLREADEKRIRKELEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein