PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0066s0109.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 368aa MW: 41397.6 Da PI: 8.168 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52 | 1.6e-16 | 44 | 91 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed ll ++++ +G g+W++ +++ g+ R++k+c++rw +yl Kaladp0066s0109.1.p 44 RGPWTPREDTLLTNYIQTHGEGNWRSLPKKAGLLRCGKSCRLRWMNYL 91 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 49.2 | 1.2e-15 | 97 | 142 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +Ed+l+++++ +lG++ W++Ia +++ gRt++++k++w+++l Kaladp0066s0109.1.p 97 RGNISSDEDDLIIRLHILLGNR-WSLIAGRLP-GRTDNEIKNYWNTHL 142 78999*****************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 368 aa Download sequence |
MPMVLGKCVL WRCCVHLAFA PIISSLRSLS MGRAPCCSKV GLHRGPWTPR EDTLLTNYIQ 60 THGEGNWRSL PKKAGLLRCG KSCRLRWMNY LRPDIKRGNI SSDEDDLIIR LHILLGNRWS 120 LIAGRLPGRT DNEIKNYWNT HLSKKLRLQG IDPDTHKPLP HGSGEANSRK KKNKKGKLSS 180 ASMTNNNNNG QINKKQEQAL TKKRNKDSRD ADEKKNRHTI HLPKPVRVKS FSMLPRNESF 240 VSMTSAASDR VINNNVGDDD NNNNNNGTGG ASFFIGDDEC GDYKMMMMRG EDGSDDLDLG 300 FDHHQYQLCA GDEDDFISGE HNLDKLYNEY LQVLKTTNEV ADNNAATTDD DHELLDQLDS 360 FAESFLV* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 169 | 206 | RKKKNKKGKLSSASMTNNNNNGQINKKQEQALTKKRNK |
2 | 171 | 208 | RKKKNKKGKLSSASMTNNNNNGQINKKQEQALTKKRNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 2e-70 | MYB family protein |